Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00602 ATGAGCGGAGCGAAGGGGAAGAAGAAGGGAGCAAGCTTCGTGATCGATTGTGCGAAGCCGGTGGAGGACAAGATTATGGACATTGCTTCTCTCGAGAAGTTTCTTCAAGAGAGGATTAAGGTCGGGGGCAAGGCCGGTGCACTCGGCGACTCCGTTACCGTCAGTCGCGACAAGAGCAAGATCACCGTCATCTCTGACAGCAACTTCTCTAAAAGGTATCTGAAATATTTGACCAAGAAGTACTTGAAAAAGCATAATGTGAGGGATTGGCTTCGGGTGATTGCATCCAACAAGGACAGGAATGTCTATGAGTTGAGATATTTCAACATTGCTGAGAATGAGGGTGAAGAGGAAGACTGA 360 0.4778 MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSRDKSKITVISDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00602 119 FunFam 60S ribosomal protein L22-2 1 119 - -
Lapu7g00602 119 Gene3D - 1 119 IPR038526 -
Lapu7g00602 119 PANTHER 60S RIBOSOMAL PROTEIN L22 3 119 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lapu7g00602 119 Pfam Ribosomal L22e protein family 9 117 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00602 Lapu-Chr7 6912131 6913305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00602 4 119 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.931 2.48e-63 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00602 K02891 - gmx:100500073 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00602 7 6912131 6913305 Lapu7g00602 7 6912131 6913305 ECH
Lapu7g00394 7 4692565 4694910 Lapu7g00602 7 6912131 6913305 ECH