Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00592 ATGGCCAACAACTTACGTGATTCCCTCCCACCATTTCTCATCCTCCTCCTACCCTTGTTTTTCTTCTCCCTAGTTTTCGCAGACACCCCTCCGACCACTCCTGTCTCCCCCGGAACCATATGCAAATCCACCCCAGACCCATCTTATTGCAGTTCCGTTCTCCCTCCCCAGAAGGGCAACATTTACGACTATGGCCGCTTCTCAGTCAGAAAGTCCCTTTCACAAGCAACCAATTTCTTGAACCTGGTTAACAGATACCTCCAACGCCGCTCCTCTCTTTCGACCTCCGCAATCCACGCGCTCCAAGATTGTCAAACCCTCGCCGAACTCAACGTCGACTTTCTCTCCAGCTCCTTCCAAACTGTCAACAGAACAACCAGGTTCCTTCCCACTTCACAAGCTGACGATATCCAAACCCTTCTCAGCGCCATTCTAACCAACCAACAAACCTGCTTGGAAGGCCTCCAAGCCACCGCCTCCGCTTGGCGCGTCAGAAGCGGACTCTTCCTCCCGCTTTCCAACGACACCAAGCTCTACACCGTCTCTCTCGCGCTCTTCACCAAAGGCTGGGTCCCTACCAACGCTAACGCCACCGCGTTTCACCCACCCGTCAAACACCGCGCCTTTCGAAACGGCCGTTTACCGCTCAAGATGTCCAGCAGAACGCGCGCCATCTACGAGTCTGTGAGTCGGAGAAAGCTCCTTCAGGCGAATGTGGGTGACGAGGTCAAAGTGAGGGACATCGTCACTGTCAGCAAGGATGGTAGCGGGAACTTCACCACCTTGAACGACGCCATTGCGGCGGCGCCCAACAAGTCTTCCTCTACATCAGGGTACTTCCTGATCTACGTCACCGCGGGTGTTTACGAAGAGAATGTGTCCATTGATAAGAAAAAGACGTACTTGATGATGATTGGAGATGGCATCAACAAGACAATTATCACAGGGAATCGCAGTGTTGTTGATGGCTGGACAACCTTCAAGTCGGCAACTTTTGCGGTGGTTGGAGCAGGTTTTGTGGGTGTTAACATGACCATCCGTAACACGGCTGGAGCAGAGAAGCACCAAGCCGTAGCACTTCGTAACGGAGCAGACTTATCCACGTTTTACAGTTGCAGTTTCGAGGGATACCAAGACACGCTCTATGCGCATTCCCTGCGACAATTCTACAGGGAATGCGACATCTACGGCACGGTGGATTTCATATTCGGAAACGCGGCGACTGTGTTTCAAAACTGCAACCTGTATCCTCGTCTTCCAATGAGTGGCCAATTCAACGCCATAACCGCACAGGGCCGAACCGACCCCAACCAAAACACTGGCATTTCTATCCATAATTGTACGATTAGAGCAGCCGATGATTTGGCTGCGAACATAAACGCGGCTGAAACTTATCTGGGAAGGCCTTGGAAAAATTACTCAAGAACGGTTTACATGCAGAGTTTTATGGACAGTGTGATCGATGCAGCTGGGTGGCGTGAATGGGACGGTGACTTTGCTTTGACCACTTTGTATTATGCAGAGTTCAACAACACTGGACCTGGATCTTCCACTGCCAACAGAGTCACATGGCCTGGTTACCACGTGATTAATGCCACCGATGCTGCTAATTTTACCGTCTCTAACTTCTTGTTCGGAGATAACTGGCTGCCTCAGACCGCAGTGCCTTACGCAAGTAACTTCGTATAG 1689 0.5133 MANNLRDSLPPFLILLLPLFFFSLVFADTPPTTPVSPGTICKSTPDPSYCSSVLPPQKGNIYDYGRFSVRKSLSQATNFLNLVNRYLQRRSSLSTSAIHALQDCQTLAELNVDFLSSSFQTVNRTTRFLPTSQADDIQTLLSAILTNQQTCLEGLQATASAWRVRSGLFLPLSNDTKLYTVSLALFTKGWVPTNANATAFHPPVKHRAFRNGRLPLKMSSRTRAIYESVSRRKLLQANVGDEVKVRDIVTVSKDGSGNFTTLNDAIAAAPNKSSSTSGYFLIYVTAGVYEENVSIDKKKTYLMMIGDGINKTIITGNRSVVDGWTTFKSATFAVVGAGFVGVNMTIRNTAGAEKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAATVFQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGISIHNCTIRAADDLAANINAAETYLGRPWKNYSRTVYMQSFMDSVIDAAGWREWDGDFALTTLYYAEFNNTGPGSSTANRVTWPGYHVINATDAANFTVSNFLFGDNWLPQTAVPYASNFV* 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00592 562 Pfam Plant invertase/pectin methylesterase inhibitor 39 185 IPR006501 GO:0004857
Lapu7g00592 562 PANTHER PECTINESTERASE 27 551 - -
Lapu7g00592 562 FunFam Pectinesterase 242 561 - -
Lapu7g00592 562 Pfam Pectinesterase 249 546 IPR000070 GO:0030599|GO:0042545
Lapu7g00592 562 SMART PMEI_2 32 185 IPR006501 GO:0004857
Lapu7g00592 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 188 IPR035513 -
Lapu7g00592 562 CDD PMEI-like_3 39 190 - -
Lapu7g00592 562 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Lapu7g00592 562 Gene3D - 242 561 IPR012334 -
Lapu7g00592 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 188 IPR035513 -
Lapu7g00592 562 FunFam Pectinesterase 38 188 - -
Lapu7g00592 562 NCBIfam pectinesterase inhibitor domain 14 159 IPR006501 GO:0004857
Lapu7g00592 562 SUPERFAMILY Pectin lyase-like 247 558 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00592 Lapu-Chr7 6793967 6795981 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00592 8 562 Carbohydrate Esterase AT4G02330 63.748 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00592 K01051 - gmx:100790729 982.245