Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00590 ATGAACAACCTCACACTTGCATCCGTTCTCACCGTGATTTCTGCATTACTCTTCTTAGCAACTCATTTGACAAACACCCCAACAAGAGTCACAGAAAAACACCTCCATTTCCAAAAGCACATACAAGTAGCCCAATCCACGTGCCGAGGAACACTCTATCCCGACCTATGTGTCTCAACCCTTGCCACATTCCCAGATCTTACCTCAAAATCTGTCCCACAAGTCATTTCTTCTGTGGTCAACCATACCATGTACGAGGTAAAATCATCGTTCTACAACTGCAGCGGCCTCAAAAAGAAGATCAGAAATCTCAACACACTCGATCAGAGAGCCCTCGACGACTGTCTCAAACTGTTCGAAGACACCAACGTGGAGCTCAAAACCACCATCGACGATCTCTCCAAGAGCACCATAGGGTCCAAACGCCACCATGACTTGCAGACTCTGCTCAGCGGAGCAATGACCAACTTGTACACGTGCCTCGACGGCTTTGCTTACAGCAAAGGGCGCGTGAGAGACAGAATCGAGAAGAAGTTGCTTGAGATATCACATCACATGAGCAACTCCTTGGCCATGCTGAAGAAAGTTCCTGGAGTGAAGAAAACAACGTCGAAATCTGAGGTGTTCCCCGAATATGGAAAGATGAAAAAGGGTTTTCCCACGTGGGTGTCCCCCAGAGACCGAAAGCTTCTCCAAGCGTCTGTGAACGAAACCAAGTTCGATATTGTCGTTGCCAAAGATGGCACCGGCAATTTCACCACTATAGGGGAAGCACTGGTTGTGGCTCCAAACTCCAGCACAACCAGGTACGTAACGTTTGTGATACACATAAAGGCGGGGGCATATTTCGAGAATGTGGAAGTGATCAGGAAGAAGACAAATCTGATGTTTGTCGGAGACGGCATTGGGAAGACAGTGGTGAAAGGCAGTAGGAACGTTGTGGACGGGTGGACAACTTTTCAATCAGCTACTGTTGCTGTTGTAGGAGAAGGATTCATTGCAAAGGGTATAACTTTCGAGAATTCAGCAGGGCCAGACAAACACCAAGCAGTGGCCCTGAGAAGTGGTGCTGACTTCTCTGCTTTCTTCCGTTGCAGTTTCGTTGGCTACCAAGACACACTTTATGTACATTCCCTACGCCAATTCTATCGTGAATGTGACATTTATGGCACTGTAGACTTCATTTTTGGCAATGCAGCTGTTGTGTTCCAAAACTGCAACTTATACGCACGTAAGCCAAACGAAAATCAAAAGAACTTGTTCACTGCACAAGGCAGAGAAGATCCTAACCAAAACACTGGCATATCCATCTTGAACTGCAAGATTGCAGCTGCTTCAGATTTAATCCCTGTGAAATCCTCCTTCAAGAGCTACCTAGGTCGTCCTTGGAAAACGTACTCAAGAACTGTTTATCTAAAATCTTACATGGAGGATCTGATTGACCCAGCAGGGTGGTTGGAATGGAATGACACATTTGCATTGGATACGCTGTATTATGGAGAGTACATGAATAAGGGTCCAGGTTCAAACACAAGTGGCAGAGTTACATGGTCAGGTTATAGGGTCATTAACAGCTCCACTGAGGCAAGCCAATTCACAGTTGGTGAGTTTATTCAAGGCAATGATTGGTTGAACACCACTGGCATTCCATTCTTCTCTGGTTTGAGTTGA 1671 0.4608 MNNLTLASVLTVISALLFLATHLTNTPTRVTEKHLHFQKHIQVAQSTCRGTLYPDLCVSTLATFPDLTSKSVPQVISSVVNHTMYEVKSSFYNCSGLKKKIRNLNTLDQRALDDCLKLFEDTNVELKTTIDDLSKSTIGSKRHHDLQTLLSGAMTNLYTCLDGFAYSKGRVRDRIEKKLLEISHHMSNSLAMLKKVPGVKKTTSKSEVFPEYGKMKKGFPTWVSPRDRKLLQASVNETKFDIVVAKDGTGNFTTIGEALVVAPNSSTTRYVTFVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTVVKGSRNVVDGWTTFQSATVAVVGEGFIAKGITFENSAGPDKHQAVALRSGADFSAFFRCSFVGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYARKPNENQKNLFTAQGREDPNQNTGISILNCKIAAASDLIPVKSSFKSYLGRPWKTYSRTVYLKSYMEDLIDPAGWLEWNDTFALDTLYYGEYMNKGPGSNTSGRVTWSGYRVINSSTEASQFTVGEFIQGNDWLNTTGIPFFSGLS* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00590 556 FunFam Pectinesterase 235 555 - -
Lapu7g00590 556 Gene3D - 235 555 IPR012334 -
Lapu7g00590 556 FunFam Pectinesterase 41 198 - -
Lapu7g00590 556 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 196 IPR035513 -
Lapu7g00590 556 CDD PMEI-like_3 46 198 - -
Lapu7g00590 556 ProSitePatterns Pectinesterase signature 2. 388 397 IPR033131 -
Lapu7g00590 556 PANTHER PECTINESTERASE 16 545 - -
Lapu7g00590 556 SMART PMEI_2 39 192 IPR006501 GO:0004857
Lapu7g00590 556 Pfam Plant invertase/pectin methylesterase inhibitor 45 192 IPR006501 GO:0004857
Lapu7g00590 556 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 198 IPR035513 -
Lapu7g00590 556 Pfam Pectinesterase 241 541 IPR000070 GO:0030599|GO:0042545
Lapu7g00590 556 NCBIfam pectinesterase inhibitor domain 15 195 IPR006501 GO:0004857
Lapu7g00590 556 SUPERFAMILY Pectin lyase-like 239 554 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00590 Lapu-Chr7 6779590 6783778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00590 68 551 Carbohydrate Esterase AT4G02320 55.734 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00590 K01051 - gmx:100802881 1001.5