Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00585 ATGTGTGGCGGTGCCATTATCGCTGACTTCATACCCCGCCGTGGCGCTCGCCGCCTCGCCGCCTCCGAGCTCTGGCCAAACTCCTTTGGAAAGGACGACGACTTCGGCTTCGATTACTCTCACATCGCTAATCAACAACCCTCCACTCTCAAAACGGCCCAACCTCCCAAAGTTAGCGAGAAAGTTGAGACTAAGCCAGTGAAAAGGCAGAGGAAGAATCTCTACAGAGGGATTCGGCAGCGCCCTTGGGGCAAATGGGCTGCGGAGATTCGTGATCCTAGAAAAGGGGTTCGTGTCTGGCTGGGCACATTCAACACTGCGGAAGAAGCTGCAAGGGCCTATGACCGTGAGGCTCGAAAAATCCGCGGCAAAAAAGCTAAGGTGAATTTCCCTAACGAGGACGACGAATATTCCATTCAAGCTCGAAATCCAATTGCTCCCCGTCCTCTGCCAACCCGAAACCCTACCCCGTATCAGCAACAGTACCGTTGTGATCTCAACAATGCCCCTACAAATCTCAACTTCGAGTTTGGTTATGACCTGAACCATGCTGGGGCCTTTTCGTCCCACGTGGACGCTGTCAACGCTGACTCGGTTGTTGTTTCCGGCGACGAAAATTCAGGTTTAGCGTCGGGTTCAGAGGGTGCTTATTCGACAAGCGAGTTCATGGGGTCTTGTCAGAAGGTGAACGGTTATTTTAGTGGCACAGTGACGGAGAAGGAGAAAGAGATAGAGGTCATTGAAGCTGAAGAGGAAAAGAACAAATTGCAGGAGCTTTCTGAGGAACTGATGGCTTACGAGAATTACATGAAGTTTTATCAGATTCCGTACTATGATGGACAATCTGTGCCACCGAATAATGTTCAGGAAAGTGTTGTCGGGGATCTCTGGAGTTTCGATTGA 903 0.5061 MCGGAIIADFIPRRGARRLAASELWPNSFGKDDDFGFDYSHIANQQPSTLKTAQPPKVSEKVETKPVKRQRKNLYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAARAYDREARKIRGKKAKVNFPNEDDEYSIQARNPIAPRPLPTRNPTPYQQQYRCDLNNAPTNLNFEFGYDLNHAGAFSSHVDAVNADSVVVSGDENSGLASGSEGAYSTSEFMGSCQKVNGYFSGTVTEKEKEIEVIEAEEEKNKLQELSEELMAYENYMKFYQIPYYDGQSVPPNNVQESVVGDLWSFD* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00585 300 Pfam AP2 domain 75 123 IPR001471 GO:0003700|GO:0006355
Lapu7g00585 300 PANTHER DNA-BINDING DOMAIN 55 227 IPR044808 GO:0003700|GO:0009873
Lapu7g00585 300 CDD AP2 75 132 IPR001471 GO:0003700|GO:0006355
Lapu7g00585 300 FunFam Ethylene-responsive transcription factor 2 73 132 - -
Lapu7g00585 300 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Lapu7g00585 300 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Lapu7g00585 300 SMART rav1_2 74 137 IPR001471 GO:0003700|GO:0006355
Lapu7g00585 300 Gene3D AP2/ERF domain 74 132 IPR036955 GO:0003700|GO:0006355
Lapu7g00585 300 Coils Coil 239 269 - -
Lapu7g00585 300 ProSiteProfiles AP2/ERF domain profile. 74 131 IPR001471 GO:0003700|GO:0006355
Lapu7g00585 300 MobiDBLite consensus disorder prediction 47 69 - -
Lapu7g00585 300 SUPERFAMILY DNA-binding domain 74 132 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00585 Lapu-Chr7 6731756 6733167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00585 1 132 AP2-EREBP Transcription Factor Family AT3G16770 57.246 8.92e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu7g00585 AP2 8.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00585 K09286 - gmx:100780763 497.278
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00585 7 6731756 6733167 Lapu7g00585 7 6731756 6733167 ECH