Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00573 ATGGGAAGAGCTCCTTGTTGTGAGAAAGTGGGGTTGAAGAAGGGGCGGTGGACAGCGGAGGAAGACGAGATCTTGGCAAAATACATTCAGGCCAATGGAGAAGGTTCATGGAGATCATTGCCTAAGAATGCAGGATTATTGAGGTGTGGCAAGAGTTGCAGACTGAGATGGATTAACTATTTGAGAGCTGACCTTAAAAGAGGGAACATTTCTGCTGAAGAGGAAAACACCATTGTCAAGTTGCACGCTTCTTTGGGTAACAGGTGGTCTTTGATAGCAAGTCATTTGCCAGGAAGAACAGACAACGAGATTAAGAATTACTGGAATTCTCACCTCAGCAGGAAAATTTACAGTTTCCCGAGGATGGAGAACCAACCAAGTGCAGGTGCAGTGGCCATGGATACACCTAAAGTGGTGTGTATTCCTCCCAGGCGAAAAGGTGGCAGAACAAGCCGTTGGGCAATGAAGAAGAACAAAACCTACACCAAAAGTGACGACAGACCCAAACACAGATTCACACAACAGATCAGTAGTGAAAGCAGAGCTCCGACGCCACCCACTCCGACGATGGAGAGCGAGGGTTTGTGGAGCGCCGTTAAGGAGTTGAAGGCGGCGGACATAAATGAAAAGTGTGAGAAGGAGAAAGGCGTGGAAAAAAGTGGCGATGGGGACATATTAGGACTGTGTGAATTTGATTGC 699 0.4735 MGRAPCCEKVGLKKGRWTAEEDEILAKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISAEEENTIVKLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLSRKIYSFPRMENQPSAGAVAMDTPKVVCIPPRRKGGRTSRWAMKKNKTYTKSDDRPKHRFTQQISSESRAPTPPTPTMESEGLWSAVKELKAADINEKCEKEKGVEKSGDGDILGLCEFDC 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00573 233 FunFam Myb transcription factor 11 67 - -
Lapu7g00573 233 FunFam Myb transcription factor 71 116 - -
Lapu7g00573 233 CDD SANT 16 61 IPR001005 -
Lapu7g00573 233 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lapu7g00573 233 MobiDBLite consensus disorder prediction 158 174 - -
Lapu7g00573 233 Gene3D - 71 116 - -
Lapu7g00573 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lapu7g00573 233 Gene3D - 11 67 - -
Lapu7g00573 233 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 179 - -
Lapu7g00573 233 MobiDBLite consensus disorder prediction 158 193 - -
Lapu7g00573 233 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lapu7g00573 233 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lapu7g00573 233 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lapu7g00573 233 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lapu7g00573 233 CDD SANT 71 112 IPR001005 -
Lapu7g00573 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lapu7g00573 233 MobiDBLite consensus disorder prediction 175 191 - -
Lapu7g00573 233 SMART sant 13 63 IPR001005 -
Lapu7g00573 233 SMART sant 66 114 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00573 Lapu-Chr7 6486833 6490903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00573 1 156 MYB Transcription Factor Family AT2G47460 72.327 1.03e-76 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu7g00573 Myb_DNA-binding 1.6e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00573 K09422 - gmx:100814275 350.903