Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00572 ATGGCTCGTCCAAGAGCCAACCTGTTCTTGTTCCTCCTATGCCTTCTGTGCTATTCTCTCCATGTCATTGCGGGAAAGAGCTACTATGACATACTTCAAATACCGAAAGGCGCGTCGGATGAGCAGATAAAGAGAGCGTATAGGAAGCTGGCGTTGAAGTACCATCCCGATAAGAACCCTGGCAACCAAGAAGCCAATAAGAAATTTGCAGAGATTAGCAATGCGTATGAAATACTCTCGGACAGTGAGATGAGAAGCATTTACGATAGGTACGGAGAAGAGGGTTTGAAGCAGCACGGTGCTGCCGGAGGGGGTAGAGGTGGTGGAATGGGAATGGACTTCCAAGACATTTTCAGCTCCTTCTTTGGGGGAGGTCAGATGGAGGAGGAAGAGAGTATTGTGAAAGGCGATGACGTGGTTGTTGAATTGGATGCAACGCTCAAAGATTTGTACATGGGAGGTTCCGTGAAGGTTTGGAGGGAGAAAAATGTTATAAAGCCAGCACCTGGGAAGAGGCGCTGTAACTGTAGAAATAAGGTTTATCACAGGCAAATAGGTTCTGGGATGTTTCAACAGTTGACCGAGCTGGTCTGTGAGCAATGTCCAAATGTTAAATATGAAAGAGAAGGTTATTTCGTAAATGTTGATGTTGAGAAAGGCATGCAAGATGGGCAGGAAGTGCTGTTTTTTGAGGATGGTGAGCCCATAATTGACGGACAGACCGGAGATCTAAGGTTTCGAATCCGTACAGCACCCCATGACCTCTTCAGAAGGGAAGACAATGACTTGCACACCACTGTCAATGTAACACTGATTCAAGCCCTTTCTGGCTTTGAGAAGACTATTAACCACCTAGATGAGCATGTGGTGGACATAAGCACGAAGGAAATCACAAATCCAGAGCAAATGAGGAAGTTCAAAGGAGAGGGCATGCCATTGCATATGAGCTCAAAGAAAGGAGATCTTTACGTCACATTTGAGGTTCTATTCCCAACCTCACTAACCGAGGAGCAGAAAACAGATATAATAGCAATTCTTGATTAG 1044 0.454 MARPRANLFLFLLCLLCYSLHVIAGKSYYDILQIPKGASDEQIKRAYRKLALKYHPDKNPGNQEANKKFAEISNAYEILSDSEMRSIYDRYGEEGLKQHGAAGGGRGGGMGMDFQDIFSSFFGGGQMEEEESIVKGDDVVVELDATLKDLYMGGSVKVWREKNVIKPAPGKRRCNCRNKVYHRQIGSGMFQQLTELVCEQCPNVKYEREGYFVNVDVEKGMQDGQEVLFFEDGEPIIDGQTGDLRFRIRTAPHDLFRREDNDLHTTVNVTLIQALSGFEKTINHLDEHVVDISTKEITNPEQMRKFKGEGMPLHMSSKKGDLYVTFEVLFPTSLTEEQKTDIIAILD* 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00572 347 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 11 12 346 - -
Lapu7g00572 347 Pfam DnaJ C terminal domain 140 331 IPR002939 -
Lapu7g00572 347 CDD DnaJ_C 137 334 - -
Lapu7g00572 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 134 258 IPR008971 GO:0006457|GO:0051082
Lapu7g00572 347 Pfam DnaJ domain 28 89 IPR001623 -
Lapu7g00572 347 ProSiteProfiles dnaJ domain profile. 27 92 IPR001623 -
Lapu7g00572 347 CDD DnaJ 28 81 IPR001623 -
Lapu7g00572 347 PRINTS DnaJ domain signature 64 84 IPR001623 -
Lapu7g00572 347 PRINTS DnaJ domain signature 47 62 IPR001623 -
Lapu7g00572 347 PRINTS DnaJ domain signature 84 103 IPR001623 -
Lapu7g00572 347 PRINTS DnaJ domain signature 29 47 IPR001623 -
Lapu7g00572 347 Gene3D DnaJ domain 24 131 IPR036869 -
Lapu7g00572 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 256 340 IPR008971 GO:0006457|GO:0051082
Lapu7g00572 347 SUPERFAMILY Chaperone J-domain 23 125 IPR036869 -
Lapu7g00572 347 Gene3D - 253 331 - -
Lapu7g00572 347 FunFam DnaJ subfamily B member 11 252 347 - -
Lapu7g00572 347 FunFam DnaJ protein ERDJ3B 24 131 - -
Lapu7g00572 347 ProSitePatterns Nt-dnaJ domain signature. 69 88 IPR018253 -
Lapu7g00572 347 Gene3D - 132 252 - -
Lapu7g00572 347 SMART dnaj_3 26 84 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00572 Lapu-Chr7 6472104 6476998 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00572 26 91 C2H2 Transcription Factor Family AT1G74250 39.437 4.69e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00572 K09517 - gmx:100799151 592.808