Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00558 ATGGCTTCGATTCAGCGTCCTGCTAGTTCAGGATCGTCGGAGGGAGGAGATCCGGCGGTGGACGAGAGGAAGAGGAAGCGGATGGAGTCCAACCGCGAATCGGCTCGGAGATCGCGCATGCGGAAGCAGAAGCAGCTGGAAAACTTAACCGAGGAAGCGAGCCGATTGCAAAGCGAGAACGCGGGTCTGGAGCAGAACATAAAGGCGAAGGAGGAAGCGTACGTTGAGATGGAAGCCGGCAACGACATTCTCAGAGCTCAGACAATGGAACTCGCCGATCGGTTGCGGTTTCTGAATTCAATTCTCGAGATTGCTGAAGAGGTCGGCGATCTCTCCGTTGAGATCCCGCAGATTCCGGACCCTCTCTTCAAGCCCTGGCAGATCCCCCACCCTATGATGACGTCGTCGGACATGTTCCTCCATGGAATTGAAGGACTGTTTGCTTCATAG 450 0.5533 MASIQRPASSGSSEGGDPAVDERKRKRMESNRESARRSRMRKQKQLENLTEEASRLQSENAGLEQNIKAKEEAYVEMEAGNDILRAQTMELADRLRFLNSILEIAEEVGDLSVEIPQIPDPLFKPWQIPHPMMTSSDMFLHGIEGLFAS* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00558 149 CDD bZIP_plant_GBF1 24 74 IPR045314 GO:0003700|GO:0006355
Lapu7g00558 149 PANTHER BZIP TRANSCRIPTION FACTOR 44 6 110 - -
Lapu7g00558 149 Gene3D - 21 76 - -
Lapu7g00558 149 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 68 IPR004827 GO:0003700|GO:0006355
Lapu7g00558 149 FunFam BZIP transcription factor 21 72 - -
Lapu7g00558 149 SUPERFAMILY Leucine zipper domain 23 77 IPR046347 GO:0003700|GO:0006355
Lapu7g00558 149 MobiDBLite consensus disorder prediction 1 64 - -
Lapu7g00558 149 MobiDBLite consensus disorder prediction 50 64 - -
Lapu7g00558 149 Coils Coil 25 80 - -
Lapu7g00558 149 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Lapu7g00558 149 MobiDBLite consensus disorder prediction 17 49 - -
Lapu7g00558 149 Pfam bZIP transcription factor 23 78 IPR004827 GO:0003700|GO:0006355
Lapu7g00558 149 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00558 Lapu-Chr7 6309576 6310686 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00558 1 139 bZIP Transcription Factor Family AT3G62420 50.000 2.70e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu7g00558 bZIP_1 1.5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00558 K25786 - gmx:778189 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00862 6 8840306 8841632 Lapu7g00558 7 6309576 6310686 PCT