Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00554 ATGGAGCTACTAAAAGGGATAAATACTCATCAAGATCAAACTCAACAACGTAGTTTCAATTTTGACCACGTGATGTTAAAGGAGTTCAACTTTGAACCTGTTCAACTACCAAAGCAGTCTTCTTTGCAAGAAACGAATGGACCAAACGATAAACAAGTGCTGCCATCTTCTTTAGCATCACTGGTTCTCCTGAGCAATTATGGAAACAGGTTCAAGAGGCCAGGGGAGCAAAACATCAGCGATGGTGTTGAAACTTGCTTAAGTTCTCAGAAGTTATCAACTGAAGAAATAATTAGAGTGGCCGGAGCAAGGTATCTTCAGCACTCTACACAGTGGTATGATGATACTTGCATCCCCATGCACCCTTATGGAATTAGTCTTGGTGTTTTATCGGAAGAAGAAAATAGGGACGTGGAACTCGTTCAGTTTCTTCTGGCAGCTGCTGAGAGGGTAGGGTGGCTGCAATTTGAACGTGCCAGCATGTTACTTTCCCATTTTCACGGGAACTTTTCAGGTGGTGGTGGAAGCCCTGTTCAAAGAGTTGTCTTTCATTTCGCTCAAGCACTTCTAAAAAGAATCAAAAGAGAAACGGGAGGAAAGGTGACACTGAACAAGTGTGAAAAAAACGAGGAAACTGAAATGATTGAGAAGCTAAGATTGGATACTAACATGGCTGTTACATGCCATAAAAAAATTCCTTTCAATCAAGTAATGCAGTTTGCTGGGGTGCAAGCTATAGTGGAACATGTGGCATTTCAAACCAGAATCCATCTCATAAACCTTGATATTGGATGTGGGGTGCAATGCACAGCTTTGATGCAAGCACTGGCTGAGAGGCATGAAAGGCAAGTTGAGCTTCTGAAGATAACTGCCATTGGACTTCAAAGTAAGACCAGACTAGAAGAGACAGGGAAAAGGTTAGTGAGTTTTGCTGAATCCTTAAACCTGCCCTTTTTATATAAGATAGTTTTTGTCACAAGCATCAAAGAGATCAAGGTTGAGCAATTTGGAATTGAAGATAATGAAGCTGTAGCTGTTTATTCTCCTTATATGCTGAGGACTATGGTGTCGGATTTAGACTCCTTGGAACACTTGATGCGGGTGATGAGAAAAATCAGACCAACTATAATGATAGTTCTTGAGTTGGAAGCAAAGCATAACTCACCCTCCTTTGTGAATCGCTTCATTGAAGCATTGTTCTTCTATGCAGCATTTTTTGACTGCATTGACACCTGCATGAAGCAGGATTATGAGTGCAGAATGCGAATAGAGGGAATATTATCAGAAGGGATACGAAGCATTGTTGCCATGGAAGATGGAGAAAGAAGGGTTAGGAATGTAAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTATAGAATGGTGGAGACTACATTTAGCGACTCATCTTTGTACCAAGCTAACTTGAAACTTGTTGGCGAGCCAGCAAATGATGCAATGGGAACCTTGTCCCTCAAGATAAATCAGTTGACAAAGCAAATCCAGGCGGAGAGAATCGTATACATTAAAGAAAAAATTCAGAACAATGAGAAGAAGCTACACTGTCACACTTCAGGAGTTCTATCAGCAATATCAACAAGGGGTTCTTCACAGACAGAGGAAAATAGGAAATCTTCAATTCTTTCAAGAATTGACCGTCCTTTATGTAAATTCAATGGTTTCTCTCCAGTCTCAGGAGACAAAGACCACAACAATCAAGATGTATTATCTGCTACGAGTATCAAAATACCATATATTGAAAGATTACCGCCATATACCTCTTGGATATTTCTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCAGTTGTTGGAAGAAGACGAATCTACTACGATCAACATGGAAGTGAAGCGCTGATATGTAGCGACAGTGAGGAAGAGTTAACAGAGCATGAGGAGGAAAAACATGAATTTTCTGAGGCTGAAGACCGTGTTCTATGGATGGCATTTGAGGAATATGGGTTAAATGAGGAGGTACTGAATATTGTTAGCGAATTTGTTGGGGGCACCAGTTCAGAAATTCAGGAGAGATACAAAAGTATCAAGGAAAAGAACACTGGTAGGTTGGATCAGGCTTCAGAAAACTCAGGAGGTTATGAATCTATTATTGGCATCTGTCCAGAGAAAAGCCTGAGTGCTGCATTAGATTCTTTTGATAATCTTTTTTGTCGCCGGTGCCTGATTTTTGACTGTCGTCTGCATGGATGTTCTCAACCTTTAGTATATCCTAGTGAAAAGCAGACACTATGGTCTGATCCTGAAGGTGACAAGAAACCATGCAGTGATCAGTGTTACCTTCAGCAGTTAAGTGTAGTCAAAGGTGTGTCAGAAGATGCAACTTCTGGGTCTCATCAGAATAAGAGAACTACCATTATGGAAGAGGCAGATGAGATATTGACACCCTCCACTATAGAGGAACCTGGTAATCAGAGTACAGCACCTTTTCCAACAGAAGTTGATTGTCATGGATCTCTCAATTTAAATGTTCCTGTCTCAGTAAGTGTGGAAAAACGGAAAGTCACAAATCTGTCAGACACTGCACTTTGTGACTCAACACTCCCTCCTGATGGTTCTCGAAATTCTAATAAAAAACTGAAGACAATCTCAGACGATGTAATTAATGTAAATAGTAATTCTAGCAATAACCTTTTGGGTGCATGTGATGAAAGTAAACAGACTGTTACTTGTGCAATTTTGGACAAATCTGTTAAACATAATTCAAATAAATTAATAGACTCTTCCAGCATTTGCCATACGGATGAGCAGGACAAAAGTATTGGGGATGGACCCAAAGATCCTACCAATAAGACAGAATTTAAGTTGTCAAGTTCAATGGAAGGAAAAGTTGATGGGATGCCGAATCTATCAGATTGGAAACCTCTTGAGAAAGAATTATACTTGAAGGGAGTAGAGATGTTTGGAAGAAATAGTTGCCTCATAGCAAGGAACTTACTTTCTGGCTTAAAGACTTGCATGGAAATAGCTAGTTACATGCATGCTGGAGGAGTGTCAATGCCCCATGGATCTATTGTTGCACCTAGTTCAATCATGGAAGACAAGGGAAAATTTGATGCAGAGTACACAGACCAGGAGATGCCATCTAGGTCACGGTTGCTGAGGAAAAGGGGAAAAACAAGGAAGTTTAAATATTCTTGGAAGTCTACTGGTCACCCATCAATATGGAAAAGAATTGCGGATGGGAAAAACCAATCTTGCAAGCAGTATACACCATGCGGATGTCAATCAATGTGTGGAAAGGAATTTGTTCAAAAAGCTGCAAAAATCGGTTCAGAGGATGCCATTGTGCCAAGAGTCAGTGCAGAAGTCGACAATGCCCTTGTTTTGCTGCCGGACGGGAATGTGACCCAGATGTTTGTCGGAATTGCTGGATTAGTCTCCTAA 3423 0.4067 MELLKGINTHQDQTQQRSFNFDHVMLKEFNFEPVQLPKQSSLQETNGPNDKQVLPSSLASLVLLSNYGNRFKRPGEQNISDGVETCLSSQKLSTEEIIRVAGARYLQHSTQWYDDTCIPMHPYGISLGVLSEEENRDVELVQFLLAAAERVGWLQFERASMLLSHFHGNFSGGGGSPVQRVVFHFAQALLKRIKRETGGKVTLNKCEKNEETEMIEKLRLDTNMAVTCHKKIPFNQVMQFAGVQAIVEHVAFQTRIHLINLDIGCGVQCTALMQALAERHERQVELLKITAIGLQSKTRLEETGKRLVSFAESLNLPFLYKIVFVTSIKEIKVEQFGIEDNEAVAVYSPYMLRTMVSDLDSLEHLMRVMRKIRPTIMIVLELEAKHNSPSFVNRFIEALFFYAAFFDCIDTCMKQDYECRMRIEGILSEGIRSIVAMEDGERRVRNVKIDVWRRFFARYRMVETTFSDSSLYQANLKLVGEPANDAMGTLSLKINQLTKQIQAERIVYIKEKIQNNEKKLHCHTSGVLSAISTRGSSQTEENRKSSILSRIDRPLCKFNGFSPVSGDKDHNNQDVLSATSIKIPYIERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEHEEEKHEFSEAEDRVLWMAFEEYGLNEEVLNIVSEFVGGTSSEIQERYKSIKEKNTGRLDQASENSGGYESIIGICPEKSLSAALDSFDNLFCRRCLIFDCRLHGCSQPLVYPSEKQTLWSDPEGDKKPCSDQCYLQQLSVVKGVSEDATSGSHQNKRTTIMEEADEILTPSTIEEPGNQSTAPFPTEVDCHGSLNLNVPVSVSVEKRKVTNLSDTALCDSTLPPDGSRNSNKKLKTISDDVINVNSNSSNNLLGACDESKQTVTCAILDKSVKHNSNKLIDSSSICHTDEQDKSIGDGPKDPTNKTEFKLSSSMEGKVDGMPNLSDWKPLEKELYLKGVEMFGRNSCLIARNLLSGLKTCMEIASYMHAGGVSMPHGSIVAPSSIMEDKGKFDAEYTDQEMPSRSRLLRKRGKTRKFKYSWKSTGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKEFVQKAAKIGSEDAIVPRVSAEVDNALVLLPDGNVTQMFVGIAGLVS* 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00554 1140 Coils Coil 628 648 - -
Lapu7g00554 1140 MobiDBLite consensus disorder prediction 926 942 - -
Lapu7g00554 1140 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 488 1094 IPR045318 GO:0006338|GO:0042054
Lapu7g00554 1140 Pfam GRAS domain family 140 478 IPR005202 -
Lapu7g00554 1140 MobiDBLite consensus disorder prediction 926 953 - -
Lapu7g00554 1140 ProSiteProfiles GRAS family profile. 131 513 IPR005202 -
Lapu7g00554 1140 SMART sant 961 1011 IPR001005 -
Lapu7g00554 1140 SMART sant 641 691 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00554 Lapu-Chr7 6267251 6285432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00554 129 453 GRAS Transcription Factor Family AT3G03450 28.571 1.29e-33 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu7g00554 GRAS 3.8e-67 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00554 - - pvu:PHAVU_007G213900g 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00554 7 6267251 6285432 Lapu7g00554 7 6267251 6285432 ECH
Lapu6g00867 6 8873347 8881173 Lapu7g00554 7 6267251 6285432 PCT