Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00545 ATGGAGAAGAAGGAGATGACTGTGAAGACTGAGGATACGGTTGGGTCCTCTTCCTTCCCTTGTTATAATTCAAACGTGTATCCATTCTCGAACGGGTTCGATTTCTCTGAGGTGGAAAAGAGTTCTTTAGGGTTTATGGAGCTACTGGGTGTGCAGGACTATAGTCCTCTGCTTGAGTTACCTCAACTTTCAACCGTTTCTGTGCCTCATCACTCTACAGTTAAGGTTCCATCTGATAACGGGAAAGAGTGTTCCGAGGTGTTGAACCACCAACCCGCCACTCCGAACTCTTCTTCTATTTCATCAGCATCCAGTGATGCAGTCAATGATGAACAGAATAAGACTCTAGACCAAGTAGAAGAAGATGATGATGAAGAAGAAGAAGGACAACAAAAGACTAAGAAACAGTTGAAGCCCAAGAAGACAAATCAGAAGAGACAGAGAGAACCAAGATTCGCGTTCATGACGAAAAGCGAGGTCGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAGGCCGTGAAAAACAGCCCTTTTCCCAGGAGCTACTATCGTTGCACCAGTGTTTCTTGTAATGTGAAGAAACGCGTGGAGCGATCTTTCACTGATCCAAGCGTTGTGGTCACAACCTATGAAGGCCAACACACACATCCAAGCCCAGTTATGCCTCGCTCAGGTGTCTCCGCTGGATACGCCACCAACTTTGCTTCAGTTTTTCCACAAGCAGGAAACTACTTATCCCAGTATCAGCAGCAACACCATCACCACCACCACCAACAACAACAACTTATTTTCAACACATTGTCCTCTTTGGGTTTCCCTTACAATGATTCTTCCTCTCCAAAGAACGCTGGTTTTACTCAAGAGAGACGGCTTTGTAATCCGGGGACCAGTGCATTTCTAAGGGACCATGGACTTCTTCAAGATGTTGTTCCTTCACACATGTTGAAAGAAGAGTAG 969 0.453 MEKKEMTVKTEDTVGSSSFPCYNSNVYPFSNGFDFSEVEKSSLGFMELLGVQDYSPLLELPQLSTVSVPHHSTVKVPSDNGKECSEVLNHQPATPNSSSISSASSDAVNDEQNKTLDQVEEDDDEEEEGQQKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTSVSCNVKKRVERSFTDPSVVVTTYEGQHTHPSPVMPRSGVSAGYATNFASVFPQAGNYLSQYQQQHHHHHHQQQQLIFNTLSSLGFPYNDSSSPKNAGFTQERRLCNPGTSAFLRDHGLLQDVVPSHMLKEE* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00545 322 Gene3D WRKY domain 148 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g00545 322 Pfam WRKY DNA -binding domain 164 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g00545 322 MobiDBLite consensus disorder prediction 84 112 - -
Lapu7g00545 322 ProSiteProfiles WRKY domain profile. 158 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g00545 322 PIRSF WRKY_txn_fact_IIc 1 322 IPR017396 GO:0003700
Lapu7g00545 322 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 262 IPR044810 GO:0003700
Lapu7g00545 322 MobiDBLite consensus disorder prediction 71 152 - -
Lapu7g00545 322 FunFam WRKY transcription factor 57 149 223 - -
Lapu7g00545 322 SMART WRKY_cls 163 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g00545 322 SUPERFAMILY WRKY DNA-binding domain 155 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00545 Lapu-Chr7 6159856 6161541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00545 34 322 WRKY Transcription Factor Family AT2G47260 47.546 9.87e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu7g00545 WRKY 3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00545 - - gmx:732591 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00545 7 6159856 6161541 Lapu7g00545 7 6159856 6161541 ECH