Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00537 ATGCCTTTTATTACATTATCAGGGGACGCCGGGAATCCACCAACCATTACTGGAAATGATACAGCATCTGCCTCTGGAAGAAATGGCACTCCCTTAGGAACGTTCCAGAGTGCAACTGTTGCTGTGGATGGTAGCTACTTTGTGGCCATCAACATGAAATTTGAGAACAGTGCTCCACATGTGATCGGAAGGAGGGGAGAACAAGGCGTGGCACTGCGGATCTCAGGAACCAAAGCTGCTTTTTACAATTGCAGTTTCGTTGGAGCTCAAGACACTCTCTATGATCACAAAGGCCTTCATTTCTTCAACAACTGCTCTATTCAAGGTTCTGTGGATTTCATCTTCGGTTCTGCCACGTTCCTTTACCAGAATTGCTATCTAAATTCCACAGCTGAGAAGGTGGCTTCCATCACTGCTCAAAAGCGAACAAATTCGTCACTGGAGAGTGGATTCTCGTTCAAAAACTGCACAGTAACTGGGAGTGGGCAGGTTTATCTAGGAAGAGCATGGGGAGATTATTCCAGAGTTGTTTTCTCTTACACCTACATGGACAACCTAGTACTCCCCAAAGGATGGAGTGATTGGGGTGACCAAAAGCGTGACTCGAGGGTATATTATGGAGAATACATGTGTAGTGGGCCAGGAGCTAACTCGGCTGGAAGAGTTCCATGGGCTCGGGTGCTTACGGATGAAGAGGTCAAGCCTTTTATTGGGACCCAATTCATTGAAGGAGACACTTGGCTGCCTCATTAG 753 0.4688 MPFITLSGDAGNPPTITGNDTASASGRNGTPLGTFQSATVAVDGSYFVAINMKFENSAPHVIGRRGEQGVALRISGTKAAFYNCSFVGAQDTLYDHKGLHFFNNCSIQGSVDFIFGSATFLYQNCYLNSTAEKVASITAQKRTNSSLESGFSFKNCTVTGSGQVYLGRAWGDYSRVVFSYTYMDNLVLPKGWSDWGDQKRDSRVYYGEYMCSGPGANSAGRVPWARVLTDEEVKPFIGTQFIEGDTWLPH* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00537 250 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 248 - -
Lapu7g00537 250 MobiDBLite consensus disorder prediction 10 28 - -
Lapu7g00537 250 MobiDBLite consensus disorder prediction 1 28 - -
Lapu7g00537 250 Pfam Pectinesterase 4 245 IPR000070 GO:0030599|GO:0042545
Lapu7g00537 250 SUPERFAMILY Pectin lyase-like 2 249 IPR011050 -
Lapu7g00537 250 ProSitePatterns Pectinesterase signature 2. 107 116 IPR033131 -
Lapu7g00537 250 Gene3D - 1 250 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00537 Lapu-Chr7 6032860 6038438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00537 2 248 Carbohydrate Esterase AT1G05310 47.266 9.97e-75 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00537 K01051 - oeu:111405716 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00537 7 6032860 6038438 Lapu7g00537 7 6032860 6038438 ECH
Lapu6g00568 6 5939545 5942798 Lapu7g00537 7 6032860 6038438 PCT