Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00535 ATGGATACTATCAGTGTTCGGGTGATGAGAAGCTTATCAGATAGTGAATTATCTGCTACATATGGAAGTGAAGAAGAGATGGTAATTAAGAAAGGATCATGGACTGAAGAAGAAGATTCTCTTCTGATCAACTATGTCAACCTCCATGGCGAAGGCCACTGGAACTCCCTCGCTCGCTCTGCAGGTCTTAAGCGAACGGGCAAAAGCTGCAGACTAAGATGGTTGAACTACTTGCGTCCAAATGTTCGACGTGGGAACATCACCCTTCAGGAACAGCTGTTGATTCTCGAACTCCATTCCCGCTGGGGCAACCGGTGGGCTAAAATAGCAGAACAATTGCCTGGTAGAACAGACAATGAAATAAAGAACTATTGGAGGACGAGAGTGGTGAAGCAAGCTAAGCAACTCAAATGTGATGTAAACAGCAAACAGTTTAGGGATGCTGTGCGTTTTGTTTGGATGCCACGCCTTATGGAGCGGATTCAGGCTTCTTCTGGGAATGCTTCTTCTTCCTACGGACATGGCCAAACCACATTGTGCAACACTCAAACTCAAAGTGAATCTAGTGGGGCCTCTGCCATGACGTTTTGTGACAACAACTCAATGATTTCCTCGTACTCATCAGGGGTTCATGTTCAGCCTCCTTTTCTCTCTTATACAAGTACAACTTCATCTTGCAATTTAATGGGAGATGGTGGCTGTTCATTGGACAGTGCTGAAAAGGGGTGGCAGCAGTGGAACTACTCTGATCTCCAAACATTTGAAACGAATCCAGGTTTTGGTGACGCAGACTTGTGGACCGATGAAAACATGTGGTTTTTGCAGCAGCATCTTGCTGATGGTTTTTGA 849 0.4535 MDTISVRVMRSLSDSELSATYGSEEEMVIKKGSWTEEEDSLLINYVNLHGEGHWNSLARSAGLKRTGKSCRLRWLNYLRPNVRRGNITLQEQLLILELHSRWGNRWAKIAEQLPGRTDNEIKNYWRTRVVKQAKQLKCDVNSKQFRDAVRFVWMPRLMERIQASSGNASSSYGHGQTTLCNTQTQSESSGASAMTFCDNNSMISSYSSGVHVQPPFLSYTSTTSSCNLMGDGGCSLDSAEKGWQQWNYSDLQTFETNPGFGDADLWTDENMWFLQQHLADGF* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00535 282 FunFam Myb transcription factor 31 83 - -
Lapu7g00535 282 ProSiteProfiles Myb-like domain profile. 79 129 IPR001005 -
Lapu7g00535 282 SMART sant 30 80 IPR001005 -
Lapu7g00535 282 SMART sant 83 131 IPR001005 -
Lapu7g00535 282 Pfam Myb-like DNA-binding domain 31 78 IPR001005 -
Lapu7g00535 282 Pfam Myb-like DNA-binding domain 84 127 IPR001005 -
Lapu7g00535 282 ProSiteProfiles Myb-like domain profile. 26 78 IPR001005 -
Lapu7g00535 282 Gene3D - 28 84 - -
Lapu7g00535 282 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 28 201 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lapu7g00535 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 133 IPR017930 -
Lapu7g00535 282 SUPERFAMILY Homeodomain-like 29 125 IPR009057 -
Lapu7g00535 282 Gene3D - 88 129 - -
Lapu7g00535 282 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 82 IPR017930 -
Lapu7g00535 282 FunFam MYB transcription factor 88 151 - -
Lapu7g00535 282 CDD SANT 33 78 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00535 Lapu-Chr7 6024685 6025782 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00535 24 278 MYB Transcription Factor Family AT2G47190 49.057 7.30e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu7g00535 Myb_DNA-binding 1.3e-16 CL0123