Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00534 ATGGATGCTAACTGTGGGCCCCTGGTAGAGACACAAGCTAAGGTGCAGCATAGTGAAAACGAGATGTCAGGCCTCAGAAAAGGTCCATGGACGGTTGACGAGGACACCATTCTGGTCAATTACATCGCCACCCATGGTGAAGGTCACTGGAACTCCGTCGCACGATGTGCAGGTTTAAGGAGGAGTGGGAAGAGTTGCAGGTTAAGGTGGCTAAACTACTTGCGCCCCGATGTGCGGCGTGGAAACATCACTCTCCAAGAACAAATACTAATTCTGGACCTTCACTCTCGGTGGGGCAACAGGTGGTCGAAGATTGCTCGGCACCTGCCAGGAAGAACAGACAATGAAATAAAGAACTATTGGAGGACGAGAGTGATAAAACAGGCGAAGCAACTCAAGTGCGATGTCAACAGCAAACAGTTCAGAGACACGTTGCGTTATGTGTGGATGCCGCGCTTACTGGAGCGGGTTCAGCCCACATCGCAAATCCTGGAGCCTCAGATGAAACTGGACCCTGGCACAAGTGAAATTGAGGGCTTTCTTCAACAAACCGAGTTTCACGGTTTAGATTCAGTGACGGAGTGGGGTAAAGGGAACCACCCCACCGGTTCTTACTCGGACTCATCATCCGTGGAGCTACAAGTTCATTCGAATTCAGACCATAGCGAGTGTTCGGGTTCGGGTCAGGATCTGTGGGCAGGTTTGAACATGCAGATGCTGGAACAGGGGAACGGTGAGAGTGAATTGCTGGAAAGTTTGTGGAATGAGCTCGAAATAAAATACAGTTCCCTTCCGTGA 798 0.505 MDANCGPLVETQAKVQHSENEMSGLRKGPWTVDEDTILVNYIATHGEGHWNSVARCAGLRRSGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIARHLPGRTDNEIKNYWRTRVIKQAKQLKCDVNSKQFRDTLRYVWMPRLLERVQPTSQILEPQMKLDPGTSEIEGFLQQTEFHGLDSVTEWGKGNHPTGSYSDSSSVELQVHSNSDHSECSGSGQDLWAGLNMQMLEQGNGESELLESLWNELEIKYSSLP* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00534 265 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 24 204 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lapu7g00534 265 Pfam Myb-like DNA-binding domain 80 123 IPR001005 -
Lapu7g00534 265 Pfam Myb-like DNA-binding domain 27 74 IPR001005 -
Lapu7g00534 265 ProSiteProfiles Myb-like domain profile. 22 74 IPR001005 -
Lapu7g00534 265 FunFam MYB transcription factor 84 147 - -
Lapu7g00534 265 CDD SANT 84 123 IPR001005 -
Lapu7g00534 265 SUPERFAMILY Homeodomain-like 24 121 IPR009057 -
Lapu7g00534 265 Gene3D - 27 79 - -
Lapu7g00534 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 78 IPR017930 -
Lapu7g00534 265 ProSiteProfiles Myb-like domain profile. 75 125 IPR001005 -
Lapu7g00534 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 129 IPR017930 -
Lapu7g00534 265 Gene3D - 84 125 - -
Lapu7g00534 265 SMART sant 79 127 IPR001005 -
Lapu7g00534 265 SMART sant 26 76 IPR001005 -
Lapu7g00534 265 FunFam Myb transcription factor 27 79 - -
Lapu7g00534 265 CDD SANT 29 74 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00534 Lapu-Chr7 6006503 6007497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00534 3 163 MYB Transcription Factor Family AT1G48000 66.049 1.23e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu7g00534 Myb_DNA-binding 2.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00534 K09422 - gmx:778065 321.242