Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00529 ATGGTGGCTGAAGCAGAGGTTGTTTGTCAACAGACCGTGGGTGTGTTGGATGTGAAGCATTTTCCAAACAAGGGAAGCGATGTTCACGAGATCGGGGAAGTAGATGCTAATTCACCTCCGAGTTTTGACCGAGTTCGTGTGACTGAGTTGGTCTCCGCCGAGTTACTCACTTCACAACAAGATGTTAAGTCTGCAGACAGGATCTCAGATGCTGCTCTTGAATCTGCAGTTCTGCAGTTTATACCTTCCCTCCGTTCAGGTAGTTTTGCTGACATCGGACCACGGAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCATCTCATATGGGATCACTATACAACTTTCCCAAGCCAAGTGCCTTTTATGGGGTGTTTGACGGACATGGAGGACCTGAAGCTGCAGCTTATATAAGAAAAAACGTGATAAAATTCTTCTTCGAAGATGTCAGTTTCCCACAGACTTCTGAAGTCAATAATGTATTTCTGGAAGAGGTAGAGGATTCCCTCAGAAAGGCGTTTCTTTTGGCTGATTCAGCTTTGGCCGATGATTGCAGTGTGAATAGTTCATCAGGCACCACGGCCCTTACTGCTTTGATATTTGGAAGGCTTCTAATGGTGGCCAATGCTGGCGACTGCCGAGCAGTTCTCTGTCGCAAAGGAGAGGCCATTGACATGTCTCAAGATCACAGGCCTATTTATCCATCCGAGCGGAGGCGTGTCGAAGAATTGGGTGGCTACATAGATGATGGCTATCTGAATGGGGTTTTATCAGTTACCCGAGCACTAGGGGACTGGGACATGAAGTTACCTAAGGGTGGTCCCTCACCTTTGATTGCAGAGCCTGAGTTCCGGCAAGTGGTTCTAACAGAGGATGATGAATTCCTCATCATAGGATGCGATGGCATTTGGGATGTCATGTCAAGTCAGCATGCAGTTAGCCTTGTTCGCAGAGGCCTGAGGAGGCACGACGACCCGGAAAAATGTGCCAGAGACTTGGTAATGGAGGCATTACGCCTGAACACATTTGACAATCTCACCGTCATCATTGTATGTTTTTCTTCCCTCGACCACATGGAGCCAGAGCCATCCCCTCCTCGCCAACGGAAATTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCCTGAGGAGCTTGTTGGAAGGCAGTGCTAGCAATTGA 1191 0.4777 MVAEAEVVCQQTVGVLDVKHFPNKGSDVHEIGEVDANSPPSFDRVRVTELVSAELLTSQQDVKSADRISDAALESAVLQFIPSLRSGSFADIGPRRYMEDEHIRIDDLSSHMGSLYNFPKPSAFYGVFDGHGGPEAAAYIRKNVIKFFFEDVSFPQTSEVNNVFLEEVEDSLRKAFLLADSALADDCSVNSSSGTTALTALIFGRLLMVANAGDCRAVLCRKGEAIDMSQDHRPIYPSERRRVEELGGYIDDGYLNGVLSVTRALGDWDMKLPKGGPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMSSQHAVSLVRRGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIVCFSSLDHMEPEPSPPRQRKLRCCSLSAEALCSLRSLLEGSASN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00529 396 PANTHER PROTEIN PHOSPHATASE 2C 74 353 IPR015655 GO:0004722|GO:0006470
Lapu7g00529 396 SMART PP2C_SIG_2 100 355 IPR001932 -
Lapu7g00529 396 Pfam Protein phosphatase 2C 95 347 IPR001932 -
Lapu7g00529 396 CDD PP2Cc 85 355 IPR001932 -
Lapu7g00529 396 ProSitePatterns PPM-type phosphatase domain signature. 124 132 IPR000222 GO:0043169
Lapu7g00529 396 SUPERFAMILY PP2C-like 79 357 IPR036457 -
Lapu7g00529 396 Gene3D - 69 361 IPR036457 -
Lapu7g00529 396 ProSiteProfiles PPM-type phosphatase domain profile. 85 355 IPR001932 -
Lapu7g00529 396 SMART PP2C_4 75 353 IPR001932 -
Lapu7g00529 396 FunFam Probable protein phosphatase 2C 22 69 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00529 Lapu-Chr7 5920212 5922893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00529 98 392 PP2C-type Phosphatase Gene Family AT3G62260 71.959 3.49e-157 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00529 K14803 - gmx:100819791 751.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00529 7 5920212 5922893 Lapu7g00529 7 5920212 5922893 ECH