Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00522 ATGGAGGCTAGATTTGGTGCAGAAGCTTATCATTTTTTTGGTGTGGGTGCTTCCTCGGATTTGAGGGGTGTGGGGAAGAGGTCCTCGGAGTGGGATTTGAATGATTGGAGATGGGATGGTGATCTGTTCATCGCAAGCCGGTTGAATCCAGTGCCGGCGGATGGTGTGGGAGTGGGACAGCAATTTTTCCCTCTTGGGTCTGGGATCCCGGTGGCCGGAGGTCCCTCCAACAGTTCTTCCTGCTCTGAGGAAGTAGATCCTAGGGATCCCAAGGGGAACAAGGAAGGGGACAAGAAAAGGAGAGTTATTGTGCTGGAGGATGATGGTTTGAATGAGGAAGCGGGTACTCTTAGTTTAAAGCTTGGTGGGCATGCGTCTGGAGTGGTGGATAGGGAAGTTGCGAGCTGGGATGGTATGAATGGGAAGAAGAGTAGAGTATCTGGAAGTACTTCAAATCGAGCTGTTTGTCAGGTGGAGGACTGCAGTGCTGATCTGAGCAAAGCTAAGGATTATCACAGACGACATAAAGTTTGTGAGATGCACTCCAAGGCCAGTAGGGCACTTGTCGGAAATGCAATGCAGAGATTCTGTCAACAATGTAGTAGGTTTCACATGCTTCAAGAGTTTGATGAAGGAAAGAGAAGCTGCAGAAGACGCTTGGCAGGACATAATAAACGAAGAAGGAAAACCAATCACGAACCTGTTCCTAATGGAAGTTCATTAAATGATGATCAGACTAGTAGCTATCTGTTGATAAGTTTATTGAAGATACTTTCAAATATGCATTCTGACAGGTCAGATCAGACTACAGATCAGGATCTACTAACTCATATTCTGAGGAGTCTTGCTAGTCAGAATGGTGAGCAAGGGGGCAAGAACATTTCTAACCTTTTGCAAGAACCAGAGAATTTGTTGAGAGAAGGGGGTTCATCAAGGAAATCAGAGATGGTGTCAACTTTATTCTCCAATGGTTCTCAAGGCTCTCCAACTGTTACAAGACAGCATGAAGCTGTGTCCATGGCTAAACTGCAGCAACAAGTGATGCATGCACGTGATGCTAGGGCTTCTGATCAGCAAAATACATGTTCTATAAAGCCCAGCATGTCAAACAGTCCTCCGGCCTATTCAGAAGCCAGAGACAGTACTGCTGGACAGATCAAGGTGAATAATTTTGATTTGAATGACATATATATTGATTCAGATGATGGTATGGAAGATCTAGAAAGATTGCCTGTCTCAACAAATCTTGTGACTAGCTCTCTTGATTACCCATGGGCACAACAAGATTCTCATCAGTCAAGTCCACCTCAAACAAGTGGAAATTCTGATTCTGCGTCTGCCCAGTCTCCTTCTAGTTCCAGTGGAGAAGCTCAGAGTCGCACAGATCGAATTGTTTTTAAGCTCTTTGGTAAAGAGCCAAATGATTTTCCTCTTGTACTCAGAGCACAGATTCTTGACTGGTTATCTCACAGTCCTACTGATATGGAGAGCTACATACGGCCTGGTTGTATTGTTTTGACCATTTATCTGCGACAGGCTGAGGCTTTGTGGGAGGAACTTTGCTATGATCTGACTTCCAGTTTGAATAGGCTGTTGGATGTCTCAGATGACACTTTTTGGAGAAATGGTTGGGTTCACATCAGGGTGCAGCATCAGATGGCCTTCATTTTTAATGGTCAAGTTGTCATAGATACCTCCTTACCTTTCAGAAGTAACAACTATAGCAAGATTTTGACTGTTAGTCCAATTGCTGTACCAGCATCAAAGAGAGCTCAATTTTCTGTTAAGGGTGTCAACCTGAGACGCCCTGCCACTAGGTTAATGTGTGCTTTAGAAGGAAAATATCTGGTCTGTGAAGATGCTCATATGTCAATGGATCAGTGCTCCAAAGAGCCTGATGAACTTCAGTGCATCCAGTTTTCATGTTCTGTCCCTGTGATGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGTTTGAGTAGCAGCTTTTTTCCTTTCATCGTTGTGGAGGAGGATGTTTGCTCAGAAATCTGTACACTTGAGCCTCTTCTAGAAATAAGTGAAACTGACCCAGATATTGAAGGGACTGGAAAAGTTAAAGCCAAAAATCAGGCCATGGATTTTATTCATGAAATGGGTTGGCTTCTGCACAGAAGCCAGTTGAAATTAAGGATGGTTCACTTGAACTCTAGCGTTGATCTCTTTCCATTGAAACGGTTCAAGTCGCTTATTGAGTTTTCCATGGATCATGATTGGTGTGCTGCAGTGAAAAAACTTCTAAATCTACTGCTTGATGGAACTGTAAATACAGGAGATCATCCTTCCCTGTATCATGCACTTTCAGAGATGGGACTCCTTCACAAAGCTGTGAGGAGAAATAGTAAGCAGTTAGTGGAGTTGCTTTTGAGATATGTTCCTGAGAATATTTCAGATCAACTAGGACCTGAAGTCAAGGCTCTAGTTGATGGAGAGAATAAGACCTTCTTGTTTAGACCCGATGTTGTTGGTCCCGCTGATTTGACACCACTCCATATAGCAGCTGGGAAAGACGGTTCTGAGGATGTACTCGATGCTTTAACTAACGATCCTTGCATGGTCGGAATTGAAGCATGGAAAAATGCTCGTGACAGCACTGGCTCCACACCTGAGGATTATGCACGTTTACGTGGTCATTATGCTTACATTCACTTGGTGCAGAAGAAAATTAACAAGAGACAAGGAGCAGCTCATGTAGTGGTTGAGATTCCAAGTAACACGATAGAGAGCAATACAAACCAGAAGCAAAATGAGTCATCCACTAGCTTTGAGATTGGAAAGGCTGCAGTAAGGCTTAGCCAAGGGCATTGTAAACTCTGTGACAGTAAAATTTCTTGCAGAACTGCAGTAGGTAGGTCTTTGGTATACAGACCTGCAATGCTCTCAATGGTAGCCATAGCTGCAGTCTGTGTCTGTGTGGCCCTTCTGTTTAAGAGCTCTCCCGAAGTAATATGTATGTTCCGACCCTTCAGATGGGAAACGTTGGACTTTGGAACAAGCTAA 3042 0.4392 MEARFGAEAYHFFGVGASSDLRGVGKRSSEWDLNDWRWDGDLFIASRLNPVPADGVGVGQQFFPLGSGIPVAGGPSNSSSCSEEVDPRDPKGNKEGDKKRRVIVLEDDGLNEEAGTLSLKLGGHASGVVDREVASWDGMNGKKSRVSGSTSNRAVCQVEDCSADLSKAKDYHRRHKVCEMHSKASRALVGNAMQRFCQQCSRFHMLQEFDEGKRSCRRRLAGHNKRRRKTNHEPVPNGSSLNDDQTSSYLLISLLKILSNMHSDRSDQTTDQDLLTHILRSLASQNGEQGGKNISNLLQEPENLLREGGSSRKSEMVSTLFSNGSQGSPTVTRQHEAVSMAKLQQQVMHARDARASDQQNTCSIKPSMSNSPPAYSEARDSTAGQIKVNNFDLNDIYIDSDDGMEDLERLPVSTNLVTSSLDYPWAQQDSHQSSPPQTSGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDMESYIRPGCIVLTIYLRQAEALWEELCYDLTSSLNRLLDVSDDTFWRNGWVHIRVQHQMAFIFNGQVVIDTSLPFRSNNYSKILTVSPIAVPASKRAQFSVKGVNLRRPATRLMCALEGKYLVCEDAHMSMDQCSKEPDELQCIQFSCSVPVMNGRGFIEIEDQGLSSSFFPFIVVEEDVCSEICTLEPLLEISETDPDIEGTGKVKAKNQAMDFIHEMGWLLHRSQLKLRMVHLNSSVDLFPLKRFKSLIEFSMDHDWCAAVKKLLNLLLDGTVNTGDHPSLYHALSEMGLLHKAVRRNSKQLVELLLRYVPENISDQLGPEVKALVDGENKTFLFRPDVVGPADLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKNARDSTGSTPEDYARLRGHYAYIHLVQKKINKRQGAAHVVVEIPSNTIESNTNQKQNESSTSFEIGKAAVRLSQGHCKLCDSKISCRTAVGRSLVYRPAMLSMVAIAAVCVCVALLFKSSPEVICMFRPFRWETLDFGTS* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00522 1013 Gene3D - 146 217 IPR036893 GO:0003677|GO:0005634
Lapu7g00522 1013 MobiDBLite consensus disorder prediction 306 381 - -
Lapu7g00522 1013 MobiDBLite consensus disorder prediction 84 102 - -
Lapu7g00522 1013 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 87 900 IPR044817 GO:0003677
Lapu7g00522 1013 MobiDBLite consensus disorder prediction 312 341 - -
Lapu7g00522 1013 MobiDBLite consensus disorder prediction 426 459 - -
Lapu7g00522 1013 Pfam SBP domain 156 229 IPR004333 GO:0003677
Lapu7g00522 1013 Gene3D - 753 915 IPR036770 -
Lapu7g00522 1013 SUPERFAMILY SBT domain 154 234 IPR036893 GO:0003677|GO:0005634
Lapu7g00522 1013 SUPERFAMILY Ankyrin repeat 783 899 IPR036770 -
Lapu7g00522 1013 MobiDBLite consensus disorder prediction 351 381 - -
Lapu7g00522 1013 ProSiteProfiles Zinc finger SBP-type profile. 153 230 IPR004333 GO:0003677
Lapu7g00522 1013 MobiDBLite consensus disorder prediction 73 102 - -
Lapu7g00522 1013 FunFam Squamosa promoter-binding-like protein 14 147 217 - -
Lapu7g00522 1013 MobiDBLite consensus disorder prediction 220 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00522 Lapu-Chr7 5875562 5884146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00522 1 1013 SBP-box Gene Family AT3G60030 54.669 0.0 980
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lapu7g00522 SBP 4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00522 - - gmx:100809806 1894.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00522 7 5875562 5884146 Lapu7g00522 7 5875562 5884146 ECH