Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00521 ATGAGTTGTTTCAGTTGTTGCGAAGAGGATGACCTCCAGAAATCTGCTGAAAGTGGAGGACCCTATGTAGTAAAAAATCCAGCAGGGAATGATGGAAATTATCATGCTTCTGAAACTGCAAAGCAGGGCACTCAGCCAGTTAAAGCTCGGCCGATTGAAGTTCCAAACATACCAGCAGATGAACTAAAAGAAGTTTCAGATAACTTTGGTCAAGATGCTCTGATTGGAGAGGGATCCTATGGAAGAGTATATTATGGTGTTCTTAAAAGTGGGCAGGCTGCTGCAATCAAGAAGTTGGATGCCAGTAAACAGCCTGATGAGGAATTTTTAGCTCAGGTTTCAATGGTATCAAGGCTGAAGCATGAAAATTTTGTTCAGTTGCTTGGATATTGCATTGATGGAAGCTCTCGTATTCTCGCATATGAGTTTGCATCTAATGGATCTCTTCATGATATTTTACATGGCAGAAAAGGTGTTAAAGGAGCACAGCCTGGTCCAGTTTTGTCATGGGCACAAAGAGTAAAAATTGCTGTAGGGGCTGCAAGAGGACTTGAATACTTGCACGAGAAGGCTGATCCCCACATTATCCACCGAGACATCAAATCAAGCAATGTGCTAATCTTTGAGGATGATGTTGCTAAAATTGCAGATTTTGATTTATCAAATCAAGCTCCCGACATGGCTGCACGTCTACATTCTACTCGTGTCCTTGGAACCTTTGGTTATCATGCTCCAGAATATGCAATGACTGGACAATTGAATGCTAAGAGTGATGTATACAGTTTTGGTGTTGTCCTTCTGGAACTTTTGACTGGAAGGAAACCTGTTGATCATACACTACCACGCGGACAGCAGAGTCTGGCTAATAACACTGATGACGACAATGGATATATGTTGTTTCAGGCTACACCAAAACTCAGTGAAGATAAAGTCAGGCAGTGTGTTGATACAAGACTAGGAGGAGAATACCCACCCAAAGCTGTTGCTAAGATGGCGGCTGTTGCTGCACTTTGTGTGCAATACGAAGCTGATTTCAGACCAAACATGAGCATTGTAGTCAAAGCTCTTCAACCTTTGCTGGCTGCACGACCTGGACCTGCCGGTGAAACACCAAATTAA 1119 0.429 MSCFSCCEEDDLQKSAESGGPYVVKNPAGNDGNYHASETAKQGTQPVKARPIEVPNIPADELKEVSDNFGQDALIGEGSYGRVYYGVLKSGQAAAIKKLDASKQPDEEFLAQVSMVSRLKHENFVQLLGYCIDGSSRILAYEFASNGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKADPHIIHRDIKSSNVLIFEDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLANNTDDDNGYMLFQATPKLSEDKVRQCVDTRLGGEYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLAARPGPAGETPN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00521 372 SUPERFAMILY Protein kinase-like (PK-like) 48 356 IPR011009 -
Lapu7g00521 372 CDD STKc_IRAK 75 359 - -
Lapu7g00521 372 Pfam Protein tyrosine and serine/threonine kinase 73 356 IPR001245 GO:0004672|GO:0006468
Lapu7g00521 372 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Lapu7g00521 372 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 362 - -
Lapu7g00521 372 Gene3D Phosphorylase Kinase; domain 1 30 143 - -
Lapu7g00521 372 FunFam PTI1-like tyrosine-protein kinase 3 33 143 - -
Lapu7g00521 372 FunFam pto-interacting protein 1 145 367 - -
Lapu7g00521 372 Gene3D Transferase(Phosphotransferase) domain 1 144 364 - -
Lapu7g00521 372 ProSiteProfiles Protein kinase domain profile. 69 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00521 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 195 207 IPR008271 GO:0004672|GO:0006468
Lapu7g00521 372 SMART serkin_6 69 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00521 372 MobiDBLite consensus disorder prediction 12 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00521 Lapu-Chr7 5857212 5861444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00521 60 357 Receptor kinase-like Gene Family AT4G02010 48.675 7.73e-85 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Lapu7g00521 PK_Tyr_Ser-Thr 6.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00521 K13436 - gmx:100808383 671.003