Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00520 ATGGAAAAGAAAACGACACTGGTCTCTGCTGTTTCTCTAATTCTCGTTGTAGGCGTTGCCCTAGGCGTTGTCGCTTATGTCTCCACCGGCAATGACGACTCCAGCAGCACAAACGACGTAAGTGGTAAGGTGACCTCCCACACAAAAGCTGTGCAAGCCGTGTGCCAAAACAGCGACGACAGGAAGTTCTGCTCCGACACGTTGACACCCGTCAACACCTCAGACCCAACCGCATACGTCAAAACTGTGGTGAAAAACGCCATGGACGGCGTCATCAAAGCATTCAACCTAAGCGACACTCTGGTTGTCGAAAACAAAAAGGTAAACTCTTCCGTCAAGATGGCCCTTGAAGATTGCAAGGACCTGTTGGATTTCGCCATCGACGAATTACAGGCCTCCGAGATTCTAGTCAAGGAGAACAACGTTAACAACATCAACGACCGCGTTGCCGAGCTCAAAAACTGGATTGGCGCCGTCGTTGCGTACCAGCAATCGTGCCTCGACGGCTTTGACACTGACGCGGAGAAGGAGGTGCAATCCAAGTTGCAAACCGAAGGCTTGGACTACGTTGGGAAGTTAACGGCGTTAGCCCTTGACGTTGTTTCCAGCTTCGCAGAAATGCTCGCAGACTTCAATTTGGATCTCAATACCAAGACTTCGTCTCGTCGTCTTCTCGAAGTGGACGGGGATGGATATCCGTCGTGGATGTCCATGTCGGATCGGAAGCTTTTGGCGGATGCAGGTAAGGGAGATACGATTCCACCTAATGTGGTTGTTGCTAAGGATGGTAGCGGCGATTATAAGACTGTTTTGGATGCTGTTAACTCATATCCCAAGAATCATCAAGGCAGATACATTATCTACGTTAAGGCTGGTATCTATGATGAGTACATCACCGTTGACAAAAAGAAGAAGAATATTCTAATCTACGGCGATGGCCCCACGAAGACAATTATCACGGGAAACAAAAACGTCAAGGACGGTTTTAAGACAATGAGATCCGCTACCTTCTCTACGGTTGGAGAAGATTTCATTGCAAAGTCTATCGCATTCGAGAACACTGCTGGCGCGGTGAAACACCAAGCAGTGGCGCTCCGCGTGCAGGGTGATCGCTCGGCTTTCTTCGACTGCGCCATGCACGGTTACCAGGACACGCTGTACACCCACGCGCATCGTCAGTTCTACCGCAACTGCGAAATCTCCGGCACGGTGGATTTCATTTTCGGCTACGGCACCACCCTAATACAGAACTCAAAGATCGTGGTAAGGAAACCCGACCCAAATCAGCAGAACATTATCGTGGCGGACGGCACAGATCAGAAGAACATGCCGACAGGAGCGGTGCTGCAGAACTGCGAGATCGTGGCGGCGCCGGATCTGGAGACGGAAAAGGCGAACTTTAGGACGTACTTGGCGAGGCCGTGGAAGGCATATTCGAGGGCCATCTTCCTAGAAAACACGATCAGCGATGTGATTCAGCCAGACGGGTTTCTTCCGTGGAGTGGGGACCAGTTCCTGGACACGTGTTTCTTTGCTGAGTATGAGAACACTGGGATGGGTGCCGATATGAAAACAAGGGTGAAGTGGAGTAAAGGGGTTCTTAGCAAGGCTGACGCTACCAAATACACTGCTGACCAATGGCTCCAAGCCAACACCTGGCTCCCTGCCACTGGCATCCCTTTCGATCTTGGCCTCACCAAA 1701 0.5103 MEKKTTLVSAVSLILVVGVALGVVAYVSTGNDDSSSTNDVSGKVTSHTKAVQAVCQNSDDRKFCSDTLTPVNTSDPTAYVKTVVKNAMDGVIKAFNLSDTLVVENKKVNSSVKMALEDCKDLLDFAIDELQASEILVKENNVNNINDRVAELKNWIGAVVAYQQSCLDGFDTDAEKEVQSKLQTEGLDYVGKLTALALDVVSSFAEMLADFNLDLNTKTSSRRLLEVDGDGYPSWMSMSDRKLLADAGKGDTIPPNVVVAKDGSGDYKTVLDAVNSYPKNHQGRYIIYVKAGIYDEYITVDKKKKNILIYGDGPTKTIITGNKNVKDGFKTMRSATFSTVGEDFIAKSIAFENTAGAVKHQAVALRVQGDRSAFFDCAMHGYQDTLYTHAHRQFYRNCEISGTVDFIFGYGTTLIQNSKIVVRKPDPNQQNIIVADGTDQKNMPTGAVLQNCEIVAAPDLETEKANFRTYLARPWKAYSRAIFLENTISDVIQPDGFLPWSGDQFLDTCFFAEYENTGMGADMKTRVKWSKGVLSKADATKYTADQWLQANTWLPATGIPFDLGLTK 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00520 567 NCBIfam pectinesterase inhibitor domain 41 184 IPR006501 GO:0004857
Lapu7g00520 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 204 IPR035513 -
Lapu7g00520 567 Pfam Plant invertase/pectin methylesterase inhibitor 50 198 IPR006501 GO:0004857
Lapu7g00520 567 PANTHER PECTINESTERASE 19 555 - -
Lapu7g00520 567 SMART PMEI_2 46 200 IPR006501 GO:0004857
Lapu7g00520 567 FunFam Pectinesterase 250 565 - -
Lapu7g00520 567 Pfam Pectinesterase 256 550 IPR000070 GO:0030599|GO:0042545
Lapu7g00520 567 CDD PMEI-like_3 53 205 - -
Lapu7g00520 567 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Lapu7g00520 567 Gene3D - 250 565 IPR012334 -
Lapu7g00520 567 FunFam Pectinesterase 47 205 - -
Lapu7g00520 567 SUPERFAMILY Pectin lyase-like 253 564 IPR011050 -
Lapu7g00520 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00520 Lapu-Chr7 5843252 5845053 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00520 2 565 Carbohydrate Esterase AT3G05610 40.806 4.46e-150 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00520 K01051 - gmx:100820142 932.554