Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00519 ATGGTGAATGGAAAAGTGCTTGTCTCTGGTGTTTCCCTCATCCTCGTGGTGGGTGTTGCGATCGGTGTTGTGGTAGTGGTTAACAAAAACTCATCTGATCCTCAAGTAGCTGCTCAACAAAAGTCGGTGAAGGCAATGTGCGAAGGCACCGAAGAACCTAAGCTTTGTCACGACACTCTCAGCACTGTGAAAGGCGGTAACACCTCTGACCCAAAGGTTTACATAGCAGCAGGAGTGGAAGCAACGATGAAAAGAGTGATCCAAGCTTTGAACATGAGCGATAGGCTCAGAGTGGAGCATGGAGAAAAGGACCCTGGCATAAAAATGGCCCTGGATGATTGCAAAGACTTGATCGAATTCGCGTTGGACAGCATCGAGTCCTCGGCTAACTTGGTTCGTGACAAGAACATTCAAGCGATGTATGACCAATCCCCAGACTTCAGGAACTGGTTGAGTGCTATAATCTCGTACCAGGAGACATGCATGGACGGGTTTAACAATGAGACAAACGGTGAGGAAGAAATTAAGAAAAAATTGGGCACAGACAGTTTGGACGAAATGGAGAAGCTCACGGGCATAGTCCTTGACATTGTGACAAACTTGTCCAATATCCTTCAGCATTTTGACTTGAAGTTGAATCTGAGCCCTGCTTCTCGGCGTCTTCTAGAGGTGGATGATGAAGGATTACCTACGTGGTTCTCTGGTGCAGATCGGAAGCTCCTTGCTAAAGTGGAAAAAGGGGAAGCAGGCGCACCAAACGCAGTGGTTGCCAAGGATGGTAGTGGTCAATTTAAAACCATTAAGGAAGCTATTGATTCCTACCCTAAAGACCTCAAAGGCAGATTTGTAATTTACGTTAAGGCTGGGATCTATGACGAGTACATCACCATTCCTAAGAAGTCAGCCAATATTCTCATTTATGGTGATGGCACTGCAAAGACCATTGTTACTGGTCGCAAGAACTTCGTAGATGGCGTCAAGACAATGCAAACTGCTACCTTCGCCAACACTGCACCAGGATTCATCGCGAAGTCAATGACATTCGAGAATACTGCTGGTGCCAGCAAGCACCAGGCAGTGGCATTCAGAAACCAGGGAGACATGTCAGCAATGTTCGACTGCGCATTTCACGGTTACCAAGATACATTGTACGTTCAGTCGAACCGTCAATTCTACCGCAACTGCGAAATTTCTGGAACAATCGACTTCATCTTCGGAGCATCTGCTGCTTTGATCCAGAACTCCAGAATCATCGCCAGGATGCCAGAAGCTAACCAGTTCAACACAGTGACCGCGGACGGAACGAAGATGAAGAACATGGCCACAGGGATCGTGCTCCAGAACTGCGAGATACTGCCAGAACAGGCTCTGTACCCTTCTAGGTTTAAAATTAAATCGTACTTGGGGAGGCCGTGGAAGCAATTTTCAAGAACAGTTGTCATGGAATCCAACATAGGTGACTTTATTCATCCAGAAGGGTGGAATGTTTGGAGTGGCGACCTGTATCTTGACACCTTGTACTATGCTGAGCATGCTAACGTTGGACCTGGTGCCAACCTTCAAGGAAGGGTCAAGTGGAAGGGTTACCATGGCAATATTAATAGGAACGAAGCCACACAATTCACTGCTGGCCAATTCCTCAAAGGTGGACCTACCGGGAATGCAGATGATTGGTTGAAGGCTACTGGGGTTCCTTACACCATGTCAAAATAG 1713 0.4705 MVNGKVLVSGVSLILVVGVAIGVVVVVNKNSSDPQVAAQQKSVKAMCEGTEEPKLCHDTLSTVKGGNTSDPKVYIAAGVEATMKRVIQALNMSDRLRVEHGEKDPGIKMALDDCKDLIEFALDSIESSANLVRDKNIQAMYDQSPDFRNWLSAIISYQETCMDGFNNETNGEEEIKKKLGTDSLDEMEKLTGIVLDIVTNLSNILQHFDLKLNLSPASRRLLEVDDEGLPTWFSGADRKLLAKVEKGEAGAPNAVVAKDGSGQFKTIKEAIDSYPKDLKGRFVIYVKAGIYDEYITIPKKSANILIYGDGTAKTIVTGRKNFVDGVKTMQTATFANTAPGFIAKSMTFENTAGASKHQAVAFRNQGDMSAMFDCAFHGYQDTLYVQSNRQFYRNCEISGTIDFIFGASAALIQNSRIIARMPEANQFNTVTADGTKMKNMATGIVLQNCEILPEQALYPSRFKIKSYLGRPWKQFSRTVVMESNIGDFIHPEGWNVWSGDLYLDTLYYAEHANVGPGANLQGRVKWKGYHGNINRNEATQFTAGQFLKGGPTGNADDWLKATGVPYTMSK* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00519 570 Pfam Plant invertase/pectin methylesterase inhibitor 42 197 IPR006501 GO:0004857
Lapu7g00519 570 PANTHER PECTINESTERASE 19 560 - -
Lapu7g00519 570 FunFam Pectinesterase 248 570 - -
Lapu7g00519 570 ProSitePatterns Pectinesterase signature 2. 397 406 IPR033131 -
Lapu7g00519 570 SMART PMEI_2 38 197 IPR006501 GO:0004857
Lapu7g00519 570 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 202 IPR035513 -
Lapu7g00519 570 FunFam Pectinesterase 39 202 - -
Lapu7g00519 570 Gene3D - 249 570 IPR012334 -
Lapu7g00519 570 Pfam Pectinesterase 253 549 IPR000070 GO:0030599|GO:0042545
Lapu7g00519 570 SUPERFAMILY Pectin lyase-like 250 567 IPR011050 -
Lapu7g00519 570 CDD PMEI-like_3 45 203 - -
Lapu7g00519 570 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 203 IPR035513 -
Lapu7g00519 570 NCBIfam pectinesterase inhibitor domain 20 201 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00519 Lapu-Chr7 5837945 5851206 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00519 6 567 Carbohydrate Esterase AT3G05610 42.179 1.21e-142 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00519 K01051 - gmx:100789650 938.717