Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00504 ATGGTGATCCTTCCGTCAAAGAACTGGATTTTTTCTCGTCAACTTCACCGTCCAAGAACACCGATACTGATAACTCAAATGCATACTAACATTCCTAAAGAGAACGGATCACGACCTCTTTTCACTGATCACCTCGTAAACACCACGCTGAATTTAATGTGTCCGAGTCAGAGTGATGAATTGTCAAGATCAGCAGCAATTGATCAAAATCTTAAATCTCCGCTGAACACACTCGAAGAGGAGTTTCTCAGACTACAAAAGGAGAATTACAAGTTGAGAACTATGTTGGACCAAATCACCAGAAACTACCACCATCTACAATTTTTCATTGCTTTACAGAAGCAAAAACCGTATCAGAATGTGGAGAAAAATGAGATGATGTCTGGTCAACATTTACTGGACCCACAATCATGCACCAAATTAGAAGCTAAAGTTGTTGCATCAGTCTCCGATGATAAATCTGGTCAAGAGGCTCATCCTGATCGTGTAGAAGATGTTGTTGAACAATCGTCCTCACAGAGTTTGGGATCATCCAAGAGTCCCAAGTTTGAAGAATCTAAGCCCGGTGAGCTTCCTTTCAGAAGAACCAGAGTTTCGGTGCGTGCAAGATCAGAAGCTCCGATGATTTGCGATGGATGTCAATGGAGGAAATATGGCCAAAAAATATCCAAGGGTAATCCCTGTCCTCGTGCCTACTATCGTTGCACCATGTCACTAGGATGCCCAGTTCGTAAACAGGTGCAAAGATGCACAGAGGACAAGAGTGTGTTGATAACAACTTACGAAGGCAATCATAACCACCCTCTTCCACCTTCAGCCACGGTCATGGCCAATTCTACCTCAGCAGCTGCAGCCATGTTCTTATCTTCTTCAGGTTCAACAACTAGTAAAGAAGCACTAAACAAGAGTGTAGGAGTATTTTCTTCCATGCCCTACATCCCAATGGCAACCCTCTCAGCCTCTGCACCATTTCCCACTATCACCCTTGACATGACCACTAACCCTATGCAACTGCACCGGGACACCTCTTCTGCTCTCACGTCCTCTCTTCCATTGCATGAAGCTACTTTTCCTCAGCTACTAGGGCACCCTATCATTTTTCCTCACAAAATGCAACATTCACTAGGGCAAAGACAACCTTCGTTTATGACAGATACGATGGCTGCAGCTGTTGCTTCGAATCCAAATTTCACTGTAGCATTAGCAGCAGCTATCTCGTCAATTATTGGAGCTCCTAGAGGCAATGATGCAAATAATAACAATAGTAACAATGGTGGAAATGTTCTTGCCCTTGGGACATCTATGTTGCCTGGATCCACTTAA 1323 0.4369 MVILPSKNWIFSRQLHRPRTPILITQMHTNIPKENGSRPLFTDHLVNTTLNLMCPSQSDELSRSAAIDQNLKSPLNTLEEEFLRLQKENYKLRTMLDQITRNYHHLQFFIALQKQKPYQNVEKNEMMSGQHLLDPQSCTKLEAKVVASVSDDKSGQEAHPDRVEDVVEQSSSQSLGSSKSPKFEESKPGELPFRRTRVSVRARSEAPMICDGCQWRKYGQKISKGNPCPRAYYRCTMSLGCPVRKQVQRCTEDKSVLITTYEGNHNHPLPPSATVMANSTSAAAAMFLSSSGSTTSKEALNKSVGVFSSMPYIPMATLSASAPFPTITLDMTTNPMQLHRDTSSALTSSLPLHEATFPQLLGHPIIFPHKMQHSLGQRQPSFMTDTMAAAVASNPNFTVALAAAISSIIGAPRGNDANNNNSNNGGNVLALGTSMLPGST* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00504 440 Coils Coil 75 95 - -
Lapu7g00504 440 Gene3D WRKY domain 194 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g00504 440 ProSiteProfiles WRKY domain profile. 204 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g00504 440 SMART WRKY_cls 209 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g00504 440 FunFam probable WRKY transcription factor 31 194 271 - -
Lapu7g00504 440 Pfam WRKY DNA -binding domain 211 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu7g00504 440 SUPERFAMILY WRKY DNA-binding domain 202 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu7g00504 440 MobiDBLite consensus disorder prediction 417 440 - -
Lapu7g00504 440 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 65 424 IPR044810 GO:0003700
Lapu7g00504 440 MobiDBLite consensus disorder prediction 167 181 - -
Lapu7g00504 440 MobiDBLite consensus disorder prediction 149 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00504 Lapu-Chr7 5702257 5705237 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00504 78 409 WRKY Transcription Factor Family AT4G04450 40.816 9.35e-73 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu7g00504 WRKY 1.6e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00504 - - vun:114192179 596.275