Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00495 ATGACGACAATGAAGCTGCTTTTGGTAGCCGTTGAACTTGCATGCTTGGTTTCTGGGATCTTCTCCTTTGGATCTGAGACACTGTCTCAGCTTTCTTTCTTAGAAAACGGTGTCGTCTCGACTCGGCCTTCCTCCTCCTCCTCCTCATCTCAACCTCAACCTCTTATGGTGGACCTCACTCTCATTCAAGGAGCTCATTCTAAAGGAGCTGTCTGTTTGGATGGAACATTGCCTGGTTACCATTTGGATCGTGGATTTGGATCTGGTGCTGATAGTTGGCTCGTTCATTTGGAGGGGGGAGGATGGTGTGATACCATCAGAAATTGTGTCTATAGAAAAAATACTCGTCGTGGTTCCTCAAAATATATGGAAAATCAAATACCATTCACGGGAATATTGAGCAACAAACCTGAGGAAAACCCTGATTTCTTTAATTGGAACAGAGTTAAGTTACGGTATTGTGACGGGGCGTCTTTCAGTGGAGATAGTGAAAATGAGTCCGCACAGCTTCAATTTCGAGGACAAAGAATATGGCTAGCTGCTATGGAGGAATTAATGTCAAAAGGAATGCAGAAAGCCGATCAGGCACTTCTCTCTGGATGCTCTGCGGGTGGTCTGGCATCCATAATACATTGTGATGAGTTCCGGAGCTTGTTTCCAGAATCTTCCAAAGTCAAATGTTTGAGTGATGCAGGTTTCTTTCTTGATGCAATTGATGTATCTGGGGGACGCACACTGAGGAATCTGTTTGGAGGTGTGGTTCAGTTACAGGAGGTACAAAAAAATCTTCCAAAAGGTTGTCTCAACCAACTGGACCCAACTTCGTGCTTCTTTCCTCAGAATATGATCGAACATATTGAAACCCCATTGTTTCTACTCAACACAGCTTATGATGTGTGGCAGGTCCAAGCAAGTTTAGCCCCACCTTCTGCTGACCGCCTTGGCTCTTGGAATGAATGCAAATCCAACCATGCAAATTGTAGCTCATCTCAAATTCAGTTCCTCCAAGACTTCAGAAATCAAATGCTGAGTGACATTAAAGACTTCTCAAGGTCAACTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGTCAGTCTGAGAGACAGGAGACATGGTTTGCTGATGACTCTCCCCTTATTGAAGACAAGCCAATTGCAGTAGCTGTTGGAGACTGGTATTTTGATCGAGAAGTTGTCAAAGCTATTGACTGTGCTTACCCGTGCGACAACAGCTGCCATAATCTGGTGTTTAACTTTAAGTGA 1269 0.4374 MTTMKLLLVAVELACLVSGIFSFGSETLSQLSFLENGVVSTRPSSSSSSSQPQPLMVDLTLIQGAHSKGAVCLDGTLPGYHLDRGFGSGADSWLVHLEGGGWCDTIRNCVYRKNTRRGSSKYMENQIPFTGILSNKPEENPDFFNWNRVKLRYCDGASFSGDSENESAQLQFRGQRIWLAAMEELMSKGMQKADQALLSGCSAGGLASIIHCDEFRSLFPESSKVKCLSDAGFFLDAIDVSGGRTLRNLFGGVVQLQEVQKNLPKGCLNQLDPTSCFFPQNMIEHIETPLFLLNTAYDVWQVQASLAPPSADRLGSWNECKSNHANCSSSQIQFLQDFRNQMLSDIKDFSRSTQTGLFINSCFAHCQSERQETWFADDSPLIEDKPIAVAVGDWYFDREVVKAIDCAYPCDNSCHNLVFNFK* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00495 422 Pfam Pectinacetylesterase 50 400 IPR004963 GO:0016787
Lapu7g00495 422 PANTHER NOTUM-RELATED 28 416 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00495 Lapu-Chr7 5594119 5599055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00495 56 419 Carbohydrate Esterase AT1G57590 72.253 0.0 583
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00495 K19882 - gmx:100786972 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00946 6 9644565 9649115 Lapu7g00495 7 5594119 5599055 ECH
Lapu7g00495 7 5594119 5599055 Lapu6g00946 6 9644565 9649115 ECH
Lapu7g00495 7 5594119 5599055 Lapu7g00495 7 5594119 5599055 ECH
Lapu3g00420 3 4259124 4265087 Lapu7g00495 7 5594119 5599055 ECH
Lapu6g00926 6 9445263 9450790 Lapu7g00495 7 5594119 5599055 PCT