Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00476 ATGGGAAACCTCTTCTGGCCTGGCATTGTTGCAGCACTTGTTTTTGGCTTCTGGGTTGATGCCTTTTCAGCCTATCAGTATCACCACTTCAATGAAACCGAGTTCTCTTTGTTGGAGTCTCAAGAACAAGCATATTCGTCTCTCCTAGGGAGGTCTCCTCTTATGGTAGGACTCACACTCATTCAAGGTGCCGCGGCCAAAGGAGCAGTTTGCTTGGATGGAACATTGCCTGGTTATCATTTACATAGGGGATACGGATCAGGAGCTAACAGCTGGATCGTTAATTTAGAGGGAGGTGGGTGGTGTAATGACGTTAGATCGTGTGTTTATCGCAAGAAAACACGGCGTGGGTCATCAAATTTCATGGAGAAACAAATACCGTTCTCCGGAATATTAAGCAATAGTGCCGAAGATAATCCAGATTTTTTCAACTGGAACAGAGTGAAAATTCGTTATTGTGATGGTGCATCGTTTGCTGGGGATAGTGAGCACAAGGCTGCTCAACTGCAATTTAGAGGACAACGTATATGGTTGGCTGCAATGGAAGATTTGATGTCAAAGGGAATGCGATTTGCCAAGCAGGCTCTTCTTTCTGGATGCTCTGCTGGTGGTCTGGCTACTATTATACACTGTGATGGATTTCGAGGGTTTTTCCCACAGACTACCAAAGTGAAGTGTCTCAGTGATGCAGGGTTATTTCTTGATGCGATTGACGTGTCTAGGGGACATACCATCAGGAATTTTTTCAGTGGTGTTGTAGGGCTTCAGGGAGTGCAGAAGAATCTACCGCGCAGTTGTACTAATCACCTTGATCCCACTTCGTGCTTCTTCCCTCAGAACTTGATTGCCAGTATTAGAACCCCGCTATTCATTCTTAATACTGCTTATGACTCATGGCAGATCCAATCTAGCTTAGCTCCTTCATCTGCCGATCCCCGTGGCTATTGGCATGATTGTAGATTAAATCATGCTAAATGTACTGCTTCACAGATCCAATATCTGCAAGGATTCAGGAATCAAATGCTGAATGATATTAGAGGCTTCTCAAGATCATATCAGAATGGATTGTTCATAAATTCATGTTTTGCTCACTGCCAATCTGAGAGGCAGGATACATGGTTCGCGGACAATTCTCCTGTCATCGGGAACAAGGCAATTGCTCTGGCTGTTGGAGACTGGTATTTCGACCGAGCTGTTGTTAAGGCCATTGATTGTCCTTACCCTTGTGATAATACATGCCACCATCTTGTCTTCAGATGA 1260 0.4452 MGNLFWPGIVAALVFGFWVDAFSAYQYHHFNETEFSLLESQEQAYSSLLGRSPLMVGLTLIQGAAAKGAVCLDGTLPGYHLHRGYGSGANSWIVNLEGGGWCNDVRSCVYRKKTRRGSSNFMEKQIPFSGILSNSAEDNPDFFNWNRVKIRYCDGASFAGDSEHKAAQLQFRGQRIWLAAMEDLMSKGMRFAKQALLSGCSAGGLATIIHCDGFRGFFPQTTKVKCLSDAGLFLDAIDVSRGHTIRNFFSGVVGLQGVQKNLPRSCTNHLDPTSCFFPQNLIASIRTPLFILNTAYDSWQIQSSLAPSSADPRGYWHDCRLNHAKCTASQIQYLQGFRNQMLNDIRGFSRSYQNGLFINSCFAHCQSERQDTWFADNSPVIGNKAIALAVGDWYFDRAVVKAIDCPYPCDNTCHHLVFR* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00476 419 PANTHER NOTUM-RELATED 52 415 IPR004963 GO:0016787
Lapu7g00476 419 Pfam Pectinacetylesterase 53 398 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00476 Lapu-Chr7 5446518 5451907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00476 1 419 Carbohydrate Esterase AT1G57590 66.983 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00476 K19882 - gmx:100810716 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00946 6 9644565 9649115 Lapu7g00476 7 5446518 5451907 PCT