LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu7g00461	ATGGGTGCTGATCTTAAAGAAGAATTGTCCGTGAAAACTCCTGTTTTTGATCTTAAGGTTTGGGAAGTAATTGGAATTGCGGTTGGATTGTTTATTATTGTCATCCTCTGTGTGCTCTCATTTTGCCTTACTTCGAGGAAGAAATCTAGAAAAGCCAGGGATAGGGTTCCTGCTAGTCATATACCTACTGTCTCAAAGGAAATCACAGAAGTGCGAGTTGAGCAAGTGCCCGCGAATGGATTTGTTCCTCGTGAAGGAATACTTCTGACAATTCATGATAAATCCAGTGACAAAGAATCAGACAAAGTTATGCTCCATTTAGGTGTTGGGAAGAAGAAGCATGGGGATAGTGGCAGTCACTCGGATTCGTTTCATTACTTGGAGAAAGATGGGGGAGGGTCACAATCAGGGGAGGAGATTAGCTCTGGCTCGGTTGGCATGTATATGCCTTCTTCTTCATACCCTATAACAGCTCCTTCACCTCTCTCTGGCCTTCCGGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACTCTGAGGGATCTTGAACTTGCTACTAACCGTTTTTCAAAAGAAAATGTAATTGGTGAGGGTGGATATGGAATTGTTTACCGGGGACAGTTGATCAATGGGACTCCAGTGGCAGTTAAAAAGATACTCAATAACATTGGTCAAGCTGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTCCGACATAAAAATTTGGTTCGACTTTTGGGATACTGTATGGAGGGAACTCACAGGATGTTAGTCTACGAATACGTCAGTAATGGAAACTTAGAGCAATGGCTTCATGGAGCTATGCGACATCATGGATATCTTACCTGGGAAGCACGTATTAAGATTCTCCTTGGCACAGCTAAGGGGCTTGCATATTTGCATGAAGCGATTGAGCCAAAGGTGGTACACCGAGATATCAAGTCAAGCAACATATTAATTGATGACGACTTTAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTGGGTTCTGGGAAGAGTCATGTTGCAACACGAGTTATGGGAACCTTCGGATATGTGGCTCCTGAATATGCAAACACTGGTCTTCTAAATGAAAAAAGTGATGTTTATAGCTTTGGTGTTGTACTATTGGAAGCAATTACCGGAAGAGATCCAGTTGACTATGGTCGCCCTGCACAGGAAGTTAATATGGTCGATTGGCTGAAGATGATGGTTGGAAACAGGCGATCAGAAGAAGTGGTGGACCCAAACATTGAGATGAAGCCATCTACCAGGGCTTTGAAACGGGCGCTCTTAACTGCTTTGAGATGTGTAGATCCAGATTCAGAGAAAAGACCCAAGATGGGTCAAGTTGTGCGTATGCTTGAGTCAGAGGAGTACCCTTTAGCTAGAGAGGACCGTAGGCATCGAAGAAATCACGGGGTTAACTCAGAAATTGAATCCCATAAGGATAGTTCTGACACGGATGGGAGTGACATTCAGGGTTCTAGATCAGAAAGTGGAAGGTAA	1524	0.437	MGADLKEELSVKTPVFDLKVWEVIGIAVGLFIIVILCVLSFCLTSRKKSRKARDRVPASHIPTVSKEITEVRVEQVPANGFVPREGILLTIHDKSSDKESDKVMLHLGVGKKKHGDSGSHSDSFHYLEKDGGGSQSGEEISSGSVGMYMPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVIGEGGYGIVYRGQLINGTPVAVKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCMEGTHRMLVYEYVSNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKGLAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGSGKSHVATRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPAQEVNMVDWLKMMVGNRRSEEVVDPNIEMKPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESEEYPLAREDRRHRRNHGVNSEIESHKDSSDTDGSDIQGSRSESGR*	508

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lapu7g00461	507	SUPERFAMILY	Protein kinase-like (PK-like)	173	469	IPR011009	-
Lapu7g00461	507	MobiDBLite	consensus disorder prediction	112	127	-	-
Lapu7g00461	507	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	311	323	IPR008271	GO:0004672\|GO:0006468
Lapu7g00461	507	SMART	serkin_6	189	460	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lapu7g00461	507	FunFam	Putative receptor-like serine/threonine-protein kinase	265	476	-	-
Lapu7g00461	507	ProSitePatterns	Protein kinases ATP-binding region signature.	195	218	IPR017441	GO:0005524
Lapu7g00461	507	ProSiteProfiles	Protein kinase domain profile.	189	468	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lapu7g00461	507	MobiDBLite	consensus disorder prediction	461	495	-	-
Lapu7g00461	507	Pfam	Protein kinase domain	190	457	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Lapu7g00461	507	Gene3D	Transferase(Phosphotransferase) domain 1	265	477	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu7g00461	Lapu-Chr7	5243501	5248993	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu7g00461	132	463	Trihelix Transcription Factor Family	AT1G70460	47.929	7.38e-93	296

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Lapu7g00461		Pkinase	4.2e-48	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu7g00461	-		-	gmx:100778269	925.235

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