Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00453 ATGGCCGGTAATGGGACCCATTCAGATTCAAAAGCTCCAACAATTGTGATTAAAGATCTCAAATTTACATACCCCGGCATCGACGGCCACCCGCCGCCGGGTTCCTCACCGCTCATTCAAAACTTTTCTCTCTCTCTCTGTTCCGGCGACCGTTGCCTTCTCGTCGGTTCCAATGGCGCCGGGAAAACCACGATCCTAAAGATACTAGGAGGGAAGCACTTGGTGGAACCTGACATGGTTCGCGTGCTTGGAAGATCAGCTTTTCACGACACCACTTTGGTGTCTTCTGGTGATCTCTGTTATCTTGGTGGCGAGTGGAGGCGAGATGTTGCTTTTGCGGGTTTTGAGGTTGCAATACAGATGGACATTTCTGCTGAAAAAATGATATTTGGTGTGGCTGGGATTGATCCTCAAAGAAGAGCGGAGCTCATCAAGGTATTGGATATTGATCTTTCCTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTACAGATTTGTATGGGTCTCCTCAAACCGTTCAAGGTTCTTCTTCTTGATGAGATAACAGTTGACCTTGATGTTCTAGCAAGAGCTGACCTTCTGAGGTTTCTAAGAAAGGAATGTGAAGAGAGGGGTGCCACCATTATCTATGCAACACATATATTTGATGGTCTCGAGGATTGGCCTACAAATATTGTTTATGTAGCCCATGGAAAGCTGCAACTAGCAATGCCTATGGACAAAGTCAAAGAAATTAGCAAATTGTCGCTAATGAGAACAGTAGAAAGTTGGCTGCGGAAAGAACGGGATGAAGATAGAAAGAAAAGAAAGGAGAGAAAAGCAGCTGGTCTTCCTGAATATGGAAAGCAAGTTGAGGGAAGCCGTGTAACAGGGGATCCTGCACGTGCTGCAGTTCGAGCAACTAATAATGGCTGGGCAGCAGGACGATTAACTTCCACCGTTGCAGGTGAAGAAAACTTTATCTTCAGCTCTAATCGAGTACTGAGGCAGTAG 1002 0.4571 MAGNGTHSDSKAPTIVIKDLKFTYPGIDGHPPPGSSPLIQNFSLSLCSGDRCLLVGSNGAGKTTILKILGGKHLVEPDMVRVLGRSAFHDTTLVSSGDLCYLGGEWRRDVAFAGFEVAIQMDISAEKMIFGVAGIDPQRRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLRFLRKECEERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPMDKVKEISKLSLMRTVESWLRKERDEDRKKRKERKAAGLPEYGKQVEGSRVTGDPARAAVRATNNGWAAGRLTSTVAGEENFIFSSNRVLRQ* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00453 333 MobiDBLite consensus disorder prediction 264 296 - -
Lapu7g00453 333 PANTHER SKFA PEPTIDE EXPORT ATP-BINDING PROTEIN SKFE 14 261 - -
Lapu7g00453 333 SMART AAA_5 48 235 IPR003593 GO:0016887
Lapu7g00453 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 250 IPR027417 -
Lapu7g00453 333 Gene3D - 13 280 IPR027417 -
Lapu7g00453 333 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 15 258 IPR003439 GO:0005524
Lapu7g00453 333 MobiDBLite consensus disorder prediction 264 281 - -
Lapu7g00453 333 Pfam ABC transporter 40 185 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00453 Lapu-Chr7 5167603 5171126 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00453 17 212 Calmodulin-binding Proteins AT2G36910 23.474 1.90e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00453 7 5167603 5171126 Lapu7g00453 7 5167603 5171126 ECH