Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00448 ATGGTGCGCACACCTAAATCCAAAGATGCTTCTTCCTCCAACGCCTTCTTCAAACCTGGCACTGTCGTGGAAGTCAGCTCCGAGGATGAAGGCTTCCGCGGCTCCTGGTTTTCCGGCACGGTAATCCGCAGTCTTGCCTCTGACAAGTTCCTAATAGAGTACCACAACCTGATGGCAGACGAGGAAAGTTCAAAGCGTTTGAGAGAAATCCTACATATCCGTCAGCTGCGGCCCATTCTCCCACTGGAGGCAGGCCCGGTATTCAAATTTGGTGACGAGGTTGACGCGTTCTACAACGATGGTTGGTGGGAGGGCTTCATAACCCAGGAATTAGAGAATGACAGGTTCGCGGTTTATTTCAGGGCTTCAAAGGAACAATTAGTGTTTTCCAAGGAACAACTCAGAATCCATCGAGAATGGTTTGATTACGATTGGGTCCCACCATTCAAACAGGATAATGATGAATGGAAGAAAAAGAAAAAAGTGTTGGTTACACAGAATGTGAAGTCTGATGAAGCTGTGAAGGCCAAGGAGTTTGGCCTTGGGGATATAGTTGAGGTTAGCAGTGACGAAGAAGGGTTCAGTGGAGCTTGGTTTGCTGCCACTGTTGTTGAGGCAAAGGGAAATGACAAGTTCGTTGTTGAGTACCAGACACTTTTAGCTGATGATGATTCTAACCTTTTGAGAGAGGAGATTGATGTTTTGCACATGAGACCTTTTCCACCAGATACTATTGTTGATGGTCAATTTAGTCTTCTTGATGAAGTTGATGCCCTGTACAATGACGGTTGGTGGGTCGGTGTGATTTCTAAAGTTCTTACTGATTCCAAATATGTAGTTTACTTCAGGTCTTCTGATGAGGAACTAGAGTTTCAGCACTCCCATCTGAGGTTGCACCAGGACTGGATTCATGGCAAATGGGTTATGCCTTCTAAGGTATGCATGGATATTCACATGTGA 960 0.4562 MVRTPKSKDASSSNAFFKPGTVVEVSSEDEGFRGSWFSGTVIRSLASDKFLIEYHNLMADEESSKRLREILHIRQLRPILPLEAGPVFKFGDEVDAFYNDGWWEGFITQELENDRFAVYFRASKEQLVFSKEQLRIHREWFDYDWVPPFKQDNDEWKKKKKVLVTQNVKSDEAVKAKEFGLGDIVEVSSDEEGFSGAWFAATVVEAKGNDKFVVEYQTLLADDDSNLLREEIDVLHMRPFPPDTIVDGQFSLLDEVDALYNDGWWVGVISKVLTDSKYVVYFRSSDEELEFQHSHLRLHQDWIHGKWVMPSKVCMDIHM* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00448 319 CDD Tudor_Agenet_AtDUF_rpt2_4 252 298 - -
Lapu7g00448 319 Gene3D - 2 85 - -
Lapu7g00448 319 Gene3D - 168 250 - -
Lapu7g00448 319 SMART agenet_At_2 177 245 IPR014002 -
Lapu7g00448 319 SMART agenet_At_2 86 142 IPR014002 -
Lapu7g00448 319 SMART agenet_At_2 15 84 IPR014002 -
Lapu7g00448 319 SMART agenet_At_2 248 304 IPR014002 -
Lapu7g00448 319 CDD Tudor_Agenet_AtDUF_rpt1_3 179 242 - -
Lapu7g00448 319 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 167 312 - -
Lapu7g00448 319 Pfam Agenet domain 182 242 IPR008395 -
Lapu7g00448 319 Pfam Agenet domain 91 148 IPR008395 -
Lapu7g00448 319 Pfam Agenet domain 20 81 IPR008395 -
Lapu7g00448 319 CDD Tudor_Agenet_AtDUF_rpt2_4 91 136 - -
Lapu7g00448 319 CDD Tudor_Agenet_AtDUF_rpt1_3 17 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00448 Lapu-Chr7 5143119 5146146 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00448 189 302 PHD Transcription Factor Family AT5G58610 30.597 7.69e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00448 - - vum:124823040 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00448 7 5143119 5146146 Lapu7g00448 7 5143119 5146146 ECH