Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00442 ATGGCGTCTTTTGAGCGCAACGTAGATTCAAGTAATTCAGAAACGTTGCGAGAATCTAATCAAAAGAAACGCAGGAAAATCGGAGACCACGCCGCCAATCACAATTCCACCAACGCTGTCCCTTGGAGATCCGAAGCGGAGCAGCGGATCTACTCGCGCCGCCTTGTTGAGGCTCTCCGCCGTAGTCCATCATCGGCGGCCAAGCCTAGAGCCGCTGGCCAAGTCCGCGAGACCGCCGACCGAGTCCTCGCCGCCACCGCCAGAGGCCAAACGCGGTGGAGCCGTGCGATTCTCGTCCGGTGGAGGAAACTCCGCACGCAGCACAAGAAGGCGAAGAAGGCGTCCACTGGATTGAAGAGAACGAGGATCAGCGGCGGAGAGAGGAGGAACCAGTTACCGGCTGTGCAGAAGAAAGCGCGCGTTCTCAGCCGGTTGGTTCCTGGTTGCCGGAAGGTCTCGTTCCCAAACCTTCTGGAAGAAGCCACGGACTATATCTCCGCCTTGGAGATGCAAGTGCGAACCATGACGGCTCTCGCCGAATTACTCTCCGGCGGCGCTCCAGCTGGTCTGGACGGTGGCGCGTTGAGTTGA 591 0.5905 MASFERNVDSSNSETLRESNQKKRRKIGDHAANHNSTNAVPWRSEAEQRIYSRRLVEALRRSPSSAAKPRAAGQVRETADRVLAATARGQTRWSRAILVRWRKLRTQHKKAKKASTGLKRTRISGGERRNQLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRTMTALAELLSGGAPAGLDGGALS* 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00442 196 MobiDBLite consensus disorder prediction 1 15 - -
Lapu7g00442 196 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 184 IPR036638 GO:0046983
Lapu7g00442 196 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 182 IPR044660 GO:0006355
Lapu7g00442 196 MobiDBLite consensus disorder prediction 1 44 - -
Lapu7g00442 196 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 119 168 IPR011598 GO:0046983
Lapu7g00442 196 CDD bHLH_AtIBH1_like 124 179 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00442 Lapu-Chr7 5091214 5091804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00442 18 175 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 45.714 3.04e-37 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00442 - - gmx:100783462 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00442 7 5091214 5091804 Lapu7g00442 7 5091214 5091804 ECH