Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00441 ATGGAGAACAAAGTGGAGATACTGCTTCCATCGCTATCCCAGACCCATACCAAGGACCTTCCTAATGTTTCCTTCGCTGCAAGGGCTGCTGACTCCCACAAAGAACACTGTTCTCCGGGTGATGACTCCGACAGCTTCTATGGTAAACTCGTTGAGTTGTTGGAGTCTTCTGGACTCACTCTCATTTTCAATGTTCGAGAAGCATTGTTGGACTTGTACCTGTTTTACTTGGAGGTGACAAGAAGAGGAGGATATCACCAGGTTGGTCGAGAAAAGAAGTGGGGTGAAGTTGTCATTGCCCTGAAATTGGAAGGGAACAGTGTGAAGTTGTGTGCTCAAGTTGAAAGGCTTTACTCACATCTTCTCTACCAGTTTGAGCAATTGTACTTCTACAGGCTTCCTGCAAAACAAACTGGCCGATCTGGCAGCAACAAGGGTCCACTTAGGAAGAAGAGGATTTCAACTGCTAGTTTGCCTCGTATAATGGATATTAAAGAAGGTCAGAAGGCCACAGAAATGTCCAAGCACTACTCTTGCCACATGACAGGGGCTGAGTATGTGCAACAGCCTGTGCTTTTACCAACACCTTCGAAAGAAAAGAAGACAGCTTCCAAAGAAAAGAAGAAACGCCGAGGTGCCCCGGTGGGACAAAAGACTGCATATCAGATATTCCTCAAGCATGAATGTGCTCGGTTGAAAACTTGTAATCAGGCCTTAGATGGCAAAATACTGAGTATGGCTATTCATTCATGGAGGACTATGTCTGAAATTGAGAAACAGCCATATGTGGAGGAAAGCAAGAAGAACAAAGAAGAAATTAAGGAAGCAATGGTTAGTCACAGTAAACATCAGAGCACCCAAGATACCAGGGAAGAGAAGTGGTCTAGCATGTGTGGTGATTACCATGTAACTTCGCAACCTGAGGCAGGTGACTCCCTAGTCAACAAAGGAACTGTTGGGGTAGCTCTTAAAATGACTGAAAAAGCACCAAAGGATCCTTCATTTCAGATGGATTGGGATGGTTATCGTCAACTAGATTTTGCAACTAGGGAATCCGAGTAA 1062 0.4463 MENKVEILLPSLSQTHTKDLPNVSFAARAADSHKEHCSPGDDSDSFYGKLVELLESSGLTLIFNVREALLDLYLFYLEVTRRGGYHQVGREKKWGEVVIALKLEGNSVKLCAQVERLYSHLLYQFEQLYFYRLPAKQTGRSGSNKGPLRKKRISTASLPRIMDIKEGQKATEMSKHYSCHMTGAEYVQQPVLLPTPSKEKKTASKEKKKRRGAPVGQKTAYQIFLKHECARLKTCNQALDGKILSMAIHSWRTMSEIEKQPYVEESKKNKEEIKEAMVSHSKHQSTQDTREEKWSSMCGDYHVTSQPEAGDSLVNKGTVGVALKMTEKAPKDPSFQMDWDGYRQLDFATRESE* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00441 353 ProSiteProfiles ARID domain profile. 40 130 IPR001606 GO:0003677
Lapu7g00441 353 Pfam ARID/BRIGHT DNA binding domain 43 126 IPR001606 GO:0003677
Lapu7g00441 353 Gene3D - 19 145 IPR036431 GO:0003677
Lapu7g00441 353 SMART bright_3 41 131 IPR001606 GO:0003677
Lapu7g00441 353 PANTHER HIGH MOBILITY GROUP B PROTEIN 9 42 292 - -
Lapu7g00441 353 CDD HMG-box_SF 218 272 - -
Lapu7g00441 353 MobiDBLite consensus disorder prediction 190 217 - -
Lapu7g00441 353 Pfam HMG-box domain 216 280 IPR009071 -
Lapu7g00441 353 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 214 281 IPR009071 -
Lapu7g00441 353 SMART ARID_2 37 126 - -
Lapu7g00441 353 SUPERFAMILY HMG-box 201 277 IPR036910 -
Lapu7g00441 353 SUPERFAMILY ARID-like 42 130 IPR036431 GO:0003677
Lapu7g00441 353 Gene3D High mobility group box domain 212 293 IPR036910 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00441 10 285 ARID Transcription Factor Family AT3G13350 24.104 1.59e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Lapu7g00441 ARID 7.8e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00441 - - var:108325455 529.25