Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00440 ATGGAGCAACTTACTCGAGAAATCGTTCTTTCTTTTGCTCTGTTTATTGTATTTTCTTTCGGGGTTTGTAGAGCAGGGGATTGTGGTGGCTCACAGATTTCAAGCACCATCATAGTTGATAAATCAAAACCAGGTTTCCAAACAATTCAGGCTGCTATTGATTCAATACAACCAAACAACGCTAAATGGGTGAAACTTCAGATAAATGCTGGCGTATACAATGAGAAGGTTCAAATCCCAGTTGATAAGCCATGCATCTTTATACAAGGCCAAGGGAAAGACATCACCACCATTACATTCAATGACCACTTAGCACCAAATACCAGTTCCACATTCACTTCGTTTGCAGACAACTTTGTTGCAGCAGACATTACTTTTCAGAACTCGTACGGTTTGGAAACACTGGAGTTTGTGCGACAGCATGGGATAACAACTTACGGGATAAGGGCTCCGTCACTGGCGGCAAGAATATCGGGAGACAAATCTGCCTTTTACAATTGTCATTTCGTGGGTTTTCAAGATACTGTCTGGGATGAAACAGGTCGTCATTACTTCAAAAATTGCGTCATTGAAGGTGCTGTCGACTTCATATTTGGCGATGGACAATCTTATTACCAGAATTGTCTGATAAATGTGACTTCCTTGGGTGCCATAACAGCACAAGCGCGCGACTCTATTAATGAGCCAACTGGTTTTGTGTTTGAAGGAGGTTCTGTGATTGGTAACAGTAATGGGGACTCGTTATTGGGCAGAGGCTATCGTAGTTGCTCCAGAGTTATATTTTACAAAACAGACCTTGGTAACGTGGTTCAACCTGTAGGATGGGAAGCTTGGAAATCTGCAACCGATGTGAGTTGCCTTTTCTACTCTGAGATTGAGTGTACAGGACCAGGTTCCAATACTGCGCAACGTGTTTCTTGGGAAAAGAAATTGACAGCCACAGACTTTACCCAGAATTTTACCATTTCAGTGTTCATCGACCAAGATGGTTGGCTCTCGCAAGTACCACTACAGAATCAGTGA 1023 0.4262 MEQLTREIVLSFALFIVFSFGVCRAGDCGGSQISSTIIVDKSKPGFQTIQAAIDSIQPNNAKWVKLQINAGVYNEKVQIPVDKPCIFIQGQGKDITTITFNDHLAPNTSSTFTSFADNFVAADITFQNSYGLETLEFVRQHGITTYGIRAPSLAARISGDKSAFYNCHFVGFQDTVWDETGRHYFKNCVIEGAVDFIFGDGQSYYQNCLINVTSLGAITAQARDSINEPTGFVFEGGSVIGNSNGDSLLGRGYRSCSRVIFYKTDLGNVVQPVGWEAWKSATDVSCLFYSEIECTGPGSNTAQRVSWEKKLTATDFTQNFTISVFIDQDGWLSQVPLQNQ* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00440 340 ProSitePatterns Pectinesterase signature 2. 190 199 IPR033131 -
Lapu7g00440 340 SUPERFAMILY Pectin lyase-like 32 334 IPR011050 -
Lapu7g00440 340 Gene3D - 30 340 IPR012334 -
Lapu7g00440 340 Pfam Pectinesterase 40 328 IPR000070 GO:0030599|GO:0042545
Lapu7g00440 340 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 33 333 - -
Lapu7g00440 340 FunFam Pectinesterase 31 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00440 Lapu-Chr7 5059655 5062069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00440 27 280 Carbohydrate Esterase AT2G19150 42.205 1.62e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00440 - - vun:114192590 469.544