Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00413 ATGAGTAGGACTGAATTATCTAATATGAAGCAGCCACCTGTCCCACTGGCAACCTTGATTGGCCGGGAGCTACGAAATGGACAAATTGAAAAGCCTTTTGTGAAGTATGGGCAAGCTGGCTTGGCAAAGAAAGGAGAAGATTACTTTCTAATCAAGACAGATTGCCAGAGAGTTCCTGGGGATTCATCAACACTCTTTTCTGTCTTTGCGATCTTTGATGGGCATAATGGTATGTCTGCTGCTATTTTTGCGAAGGAAAACATACTAAGTAATGTTTTGAGTGCAATACCGCCAGATATCAGTAGGGATGAATGGCTTCAAGCTCTGCCTCGTGCTCTAGTTGTTGCTTTTGTAAAAACTGACATAGAGTTTCAGAAAAAAGGGGAAACTTCTGGAACAACAGCTACATTTGTTCTTATTGATGGATGGACTGTTACTGTTGCATCTGTTGGGGATTCCCGTTGCATATTAGATGCACAGGGAGGTGTTGTTTCCCTCTTGACAGTTGATCACAGATTGGAAGAAAATGCAGAAGAGAGGGAACGCATTACTGCCAGTGGTGGTGAAGTAGGAAGACTGAACGTTTTCGGAGGCAATGAGGTGGGGCCTCTTCGCTGCTGGCCTGGTGGATTGTGTCTTTCTAGATCCATTGGTGACACGGACGTGGGAGAATTTATTGTGCCAATACCACACGTTAAACAAGTGAAGCTTTCAAATGCTGGTGGAAGACTTATTATAGCTTCTGATGGCATTTGGGATGCTTTATCTTCTGATATGGCTGCCAAATCATGCCGGGGCCTGCCTGCAGAGCTTGCTGCAAAGCTGGTGGTTAAGGAAGCTCTAAGGTCAAGGGGGCTGAAGGATGATACAACTTGCCTCGTTGTAGATATTATTCCGTCAGATCATCCTGTATTACCAACAATTCCAACAAAGAAGCATAATATGCTAACTTCGCTTTTATTTGGAAAGAAATCTCAAAACTCTACAAACAAAAGTACCAATAAGCTTTCTGCTGTAGGTGTTGTGGAGGAATTATTTGAAGAGGGTTCTGCTATGCTTACAGAGAGATTGGGTAAGGATTTTCCATCTAATACGAATTCTGGAATGTTCCGCTGTGTGGTTTGCCAAGCAGATCAACCCTCTGGAGATGGTTTATCAATGAACACTGGGTCCTTTTTTTCTCCAGTATCTAAGCCATGGGAAGGTCCGTTCCTCTGCACAAACTGTCAGAAGAAGAAAGATGCCATGGAAGGAAAAAGGTCTAGCAGGCCCTCAGAAACAGCATAG 1287 0.4367 MSRTELSNMKQPPVPLATLIGRELRNGQIEKPFVKYGQAGLAKKGEDYFLIKTDCQRVPGDSSTLFSVFAIFDGHNGMSAAIFAKENILSNVLSAIPPDISRDEWLQALPRALVVAFVKTDIEFQKKGETSGTTATFVLIDGWTVTVASVGDSRCILDAQGGVVSLLTVDHRLEENAEERERITASGGEVGRLNVFGGNEVGPLRCWPGGLCLSRSIGDTDVGEFIVPIPHVKQVKLSNAGGRLIIASDGIWDALSSDMAAKSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPTIPTKKHNMLTSLLFGKKSQNSTNKSTNKLSAVGVVEELFEEGSAMLTERLGKDFPSNTNSGMFRCVVCQADQPSGDGLSMNTGSFFSPVSKPWEGPFLCTNCQKKKDAMEGKRSSRPSETA* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00413 428 ProSiteProfiles PPM-type phosphatase domain profile. 32 297 IPR001932 -
Lapu7g00413 428 Gene3D - 33 301 IPR036457 -
Lapu7g00413 428 SMART PP2C_4 23 295 IPR001932 -
Lapu7g00413 428 Pfam Protein phosphatase 2C 63 280 IPR001932 -
Lapu7g00413 428 SUPERFAMILY PP2C-like 38 297 IPR036457 -
Lapu7g00413 428 PANTHER PROTEIN PHOSPHATASE 46 296 IPR015655 GO:0004722|GO:0006470
Lapu7g00413 428 FunFam probable protein phosphatase 2C 5 35 302 - -
Lapu7g00413 428 CDD PP2Cc 43 297 IPR001932 -
Lapu7g00413 428 SMART PP2C_SIG_2 50 297 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00413 Lapu-Chr7 4821675 4825149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00413 1 427 PP2C-type Phosphatase Gene Family AT1G09160 76.347 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00413 - - gmx:100794630 803.512