Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00406 ATGGGGCATTTTTCATCTGCGTTCAATAGGTTGGCAAAGCCCTTTGCAACAAAGAAAGGTGGGAGGTCTGATGGATGCAACGGAAGAGAGGCTGCGGAAGCAATGGCAAAGGAAGCCAAAAAAAATCACTTTATACTGCATAGCTCCGGCACCATTAGTGTTGATGGTTCAAACAATTTTGCCTCACTTTTCTCCAAAAAAGGCAAGAAAGGAGTCAATCAGGATTGCTGCGTAGTGTGGGAAGAATTTGGGTGCCAAGAGGACATGATCTTCTGTGGGATTTTTGACGGGCACGGGCCATGGGGTCACTTTGTGGCCAAGAGAGTAAGAGAGTCAATGCCACCATCTTTGCTATGCAACTGGCAGGAGACACTTTCCCAAACTTCACTTGATCCAGGTGTTGATGTTGATATTGCGACAGAGAAAAAGCAACACCGGTTTAATATATGGAAACACTCTTACTTGAAGACTTGTGCTGCCATTGATCGAGAACTAAAGCAGAATCGCAAGATAGATTCATTTTTCAGCGGAACAACTGCCTTGTCCATTGTTAGACAGGGTGAACTCATTGTAATTGCAAACGTTGGTGACTCTCGTGCTGTGTTAGCCACAGCGTCAGATGATGGAAGTTTGGTAGCAGTTCAGTTGACAGTAGACTTCAAGCCCAGTTTACCTCAGGAAGCAGAGAGAATACTGGAGTGCCAAGGACGGGTGTTCTGCTTAGAAGACGAGCCTGGGGTGCACAGGGTGTGGTTACCGGATGAGGAGTCTCCAGGACTTGCCATGTCAAGGGCTTTTGGTGACTACTGCATAAAGGAGTATGGTCTTATTTCAGTGCCTGAGGTAACACACAGGAACATAACCAGCAAAGACCAGTTTGTTGTGCTAGCCACTGATGGGGTGTGGGATGTGATATCCAATCAAGAAGCAGTGGATATTGTGTGTTCAACGGAAGACAGAACAGAGTCAGCCAAACATTTGGTGGAGTGTGCAATGCGTGCATGGAAACGCAAGAGGAGGGGCATTGCAATGGATGATATTTCAGCTATTTGTCTCTTCTTTCACTCTTCACCATCACTTGGCCAAGTTGATGCCACCCTAGAATAG 1107 0.4634 MGHFSSAFNRLAKPFATKKGGRSDGCNGREAAEAMAKEAKKNHFILHSSGTISVDGSNNFASLFSKKGKKGVNQDCCVVWEEFGCQEDMIFCGIFDGHGPWGHFVAKRVRESMPPSLLCNWQETLSQTSLDPGVDVDIATEKKQHRFNIWKHSYLKTCAAIDRELKQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATASDDGSLVAVQLTVDFKPSLPQEAERILECQGRVFCLEDEPGVHRVWLPDEESPGLAMSRAFGDYCIKEYGLISVPEVTHRNITSKDQFVVLATDGVWDVISNQEAVDIVCSTEDRTESAKHLVECAMRAWKRKRRGIAMDDISAICLFFHSSPSLGQVDATLE* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00406 368 SMART PP2C_4 51 352 IPR001932 -
Lapu7g00406 368 PANTHER PROTEIN PHOSPHATASE 43 352 IPR015655 GO:0004722|GO:0006470
Lapu7g00406 368 Pfam Protein phosphatase 2C 84 332 IPR001932 -
Lapu7g00406 368 CDD PP2Cc 59 354 IPR001932 -
Lapu7g00406 368 Gene3D - 51 356 IPR036457 -
Lapu7g00406 368 FunFam Probable protein phosphatase 2C 34 51 356 - -
Lapu7g00406 368 SUPERFAMILY PP2C-like 58 356 IPR036457 -
Lapu7g00406 368 ProSiteProfiles PPM-type phosphatase domain profile. 60 354 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00406 Lapu-Chr7 4774511 4777783 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00406 1 355 PP2C-type Phosphatase Gene Family AT3G05640 70.391 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00406 - - gmx:100793051 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00406 7 4774511 4777783 Lapu7g00406 7 4774511 4777783 ECH
Lapu6g01003 6 10143153 10146428 Lapu7g00406 7 4774511 4777783 PCT