Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00404 ATGTCGTCTGAGCCGCTGATTCCACCGTCGGAAACATTACCAACTTCTCACTCCTTCCGGCGATGCGGCGAAACGGTGTGGATTTTCGACGAGTTGCCGAAGGCCACCGTCGTTTCCGTGTCGAGGACAGAGACCGGAGACATTAGCTCAATCCTCCTTTCTTATACCATTCGGTTGCAGTACAAACAGTTTAACTGGCGTATAGTGAAGAAGGCATCACAACTTCTTTATTTACAGTTCTGTCTGCGGAAACGTGCAATAATTGAAGATTTTCATGACAAGCAAGAGCAGTTGAAAGAATGGCTTCAAAACTCGGGAATAGTAGATCAAACAGTAATGGAGCAAGAGGATGAAGAACCTGGTGATGGAACTGTGCCTTTACGTCATGAAGACAGTGTTAAACACAGATATGTTCCATCCGTTGCTGCTCTATCAATAATTCGTCCATCACTAGGAGGGCAGCAGTCAATTGCTGGTAGAGCCAAAGCTGCAATGCAGGCTTATTTGAATCATTTTTTAGGAAACTTGGATATTGTGAATTCTCGAGAGGTCTGCAAGTTTTTGGAAGTCTCCAAGCTATCCTTTTTGCAGGAGTATGGTCCAAAATTGAAAGAGGGATATGTAATGGTGAAGCATTTGTCAAATATTTCACAGGATTTGGATGTATCATGTTTCCCGTGCAATTGGTTTCATTGTTGTAATAACAACTGGAAGAAGGTATGGGCTGTTTTGAAACATGGGTTTTTGGCCCTCCTGGATGATCCCTTCAACAACAAACCACTGGATATAATTATTTTTGATATCCTCCCTTCCTCTAATGGAGATGGAGGGAACAAAATATATTTAGCTGATCCTATAGAAGTGCGCAATCCTTTGCGATATACATTCAAGGTTACTAGTGGAAATAGGAGCATAATGTTGAGAACTACCAGTAGTGCTAAAGTAAAAGCTTGGGTTGCTGCAATAAACGAAACTAGTCTAAGACCTCTTGAAGGTTGGTGTTATCCTCATCGCTTTGGTTCGTTTGCTCCCGTAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAATGGTTTGTTGATGGACAGGCAGCATTTGAAGCTATTGCTACTTCAATTCAAGATGCAAAGTCAGAGATCTTTATTACGGGCTGGTGGCTATGCCCAGAACTATATCTGAGGCGGCCTTTTGATAGTTTTTCTACCTCTCGGCTAGATTCCTTACTAGAAGAAAAGGCTAAGCAAGGGGTTCAGATCTATGTGCTTCTCTACAAGGAGGTTTCTCTAGCTTTGAAAATCAACAGCTTGTACAGTATGAGAAGACTACTCAAAATTCATGAGAATGTGAAGGTATTGCGCTATCCGGATCATTTTGCTGCTCGAGTGTATTTATGGTCGCACCATGAAAAACTTGTAATTATTGATTACAAGATTTGCTATATTGGAGGATTAGATTTATGCTTTGGTCGATATGACTCACCTGAACATAAAGTGGGTGACTGCCCTTCTGTAATATGGCCTGGAAAGGACTATTACAACCCAAGGGAATCTGAGCCAAATTCATGGGAAGACACCATGAGGGATGAATTGGATCGCAAGAAATGTCCCCGTATGCCATGGCATGATGTCCATTGTGCTCTTTGGGGACCTCCCTGTCGTGACATTGGTCGTCATTTTGTTCAACGTTGGAACCATGCTAAGAGAACCAAAGCTCCAAATGAACATGCAATTCCTCTGCTTATGCCTCACCATCACATGGTCATTCCTCATTACATGGCAAGAAGCAGTGAGATGGACATTGAAGAAAACAAAGATGAAAACAAGAGGAAAGAAATTGATAGGCAAGATTCATTTTCTTCAGAGTCTCCAATGCAAGATATACCACTACTTTTACCACAAGAAGCTGATAGTGAAATTTATCTGTTGCCGGAGCACGAAACTCTAGTTTCAGACACCCAGATGAAAGGTTTTCAGGATGAAGTTGTTCCTTCATACTTGGGAGCACAATCTTTTGTCGATGTTCTAGATGATTGGTGGGAAGCACTAGAAGGCACCGATGATGACACTACTTTGGAGTATGGACAAGTTGGTCCACGCACCACTAGTCACTGCCAAGTAATCAGAAGTGTCAGTCAGTGGTCTGCTGGAACAAGTCAACCTGAAGAAAGCATTCACACTGCATATTGTTCCCTTATTGAAAAAGCAAAACATTTTATCTACATTGAGAACCAATTTTTCATATCAGGTCTATCAGGGGATGACATAATACAGAACCGTATTTTGGAAGCTCTATATAGGCGTATTTTGCAAGCCCACAAAGAACGGAGAGATTTTAGAGTTATAGTAGTGATTCCCCTCTTACCTGGCTTCCAGGGTGGTCTAGATGATGGTGGTGCTGCTACTGTGAGAGCCTTAACACATTGGCAGTATAGAACGATTTCTAGAGAAAAGCACTCGATATTATACAATCTTGAAGCTATACTTGGTCCGAAGACACATGATTATATTTCTTTCTATGGTTTACGATCTCATGGTAGACTTTATGAAAATGGTCCTGTGGCTACAAGTCAGGTGTATGTGCACAGTAAATTGATGATAATTGATGATCGTGTAGCTTTTATTGGATCATCTAATATAAATGACCGCAGTTTGCTAGGTTTAAGAGACTCTGAGATTGGAGTGCTTATAGAAGATAAAGAATATGTTGAATCTTTGATGAATGGAAAGCCATGGAAGGCTGGAAAATTTTCCTATAGCCTCCGCTGCTCCCTATGGTCTGAGCACCTTGGTCTTCATACAGAAGAGATCAGTAAAATCAGTGATCCGGTGGTAGATGCAACCTACAAGGACTTGTGGTCAGCAACTGCAAAGAAAAATACTAGTATATACCATGAGGTCTTTGCTTGCATTCCCAACGATCAAATACACTCAAGAGCTGCCCTTCGGCAAAGCATGGTTCACTCGAAAGAAAAACTTGGTCATACCACCACAGATATGGGAATTGCCCCTGATAAGTTGGTCTGTCATGAGAATGGAGAAACCAAAACAATAGACCCGATAGATAGGTTGAAGTCTGTGAAGGGACACCTTGTTTCCTTTCCTTTGGAGTTCATGCGTGAGGAAGATTTAAGACCAGCTGTTATGGAGAGCGAATTTTATGTTGCTCCTCAAGTGTATCATTGA 3180 0.4176 MSSEPLIPPSETLPTSHSFRRCGETVWIFDELPKATVVSVSRTETGDISSILLSYTIRLQYKQFNWRIVKKASQLLYLQFCLRKRAIIEDFHDKQEQLKEWLQNSGIVDQTVMEQEDEEPGDGTVPLRHEDSVKHRYVPSVAALSIIRPSLGGQQSIAGRAKAAMQAYLNHFLGNLDIVNSREVCKFLEVSKLSFLQEYGPKLKEGYVMVKHLSNISQDLDVSCFPCNWFHCCNNNWKKVWAVLKHGFLALLDDPFNNKPLDIIIFDILPSSNGDGGNKIYLADPIEVRNPLRYTFKVTSGNRSIMLRTTSSAKVKAWVAAINETSLRPLEGWCYPHRFGSFAPVRGLTEDGSQAQWFVDGQAAFEAIATSIQDAKSEIFITGWWLCPELYLRRPFDSFSTSRLDSLLEEKAKQGVQIYVLLYKEVSLALKINSLYSMRRLLKIHENVKVLRYPDHFAARVYLWSHHEKLVIIDYKICYIGGLDLCFGRYDSPEHKVGDCPSVIWPGKDYYNPRESEPNSWEDTMRDELDRKKCPRMPWHDVHCALWGPPCRDIGRHFVQRWNHAKRTKAPNEHAIPLLMPHHHMVIPHYMARSSEMDIEENKDENKRKEIDRQDSFSSESPMQDIPLLLPQEADSEIYLLPEHETLVSDTQMKGFQDEVVPSYLGAQSFVDVLDDWWEALEGTDDDTTLEYGQVGPRTTSHCQVIRSVSQWSAGTSQPEESIHTAYCSLIEKAKHFIYIENQFFISGLSGDDIIQNRILEALYRRILQAHKERRDFRVIVVIPLLPGFQGGLDDGGAATVRALTHWQYRTISREKHSILYNLEAILGPKTHDYISFYGLRSHGRLYENGPVATSQVYVHSKLMIIDDRVAFIGSSNINDRSLLGLRDSEIGVLIEDKEYVESLMNGKPWKAGKFSYSLRCSLWSEHLGLHTEEISKISDPVVDATYKDLWSATAKKNTSIYHEVFACIPNDQIHSRAALRQSMVHSKEKLGHTTTDMGIAPDKLVCHENGETKTIDPIDRLKSVKGHLVSFPLEFMREEDLRPAVMESEFYVAPQVYH* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00404 1059 Gene3D Endonuclease Chain A 679 919 - -
Lapu7g00404 1059 Gene3D Endonuclease Chain A 348 609 - -
Lapu7g00404 1059 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 462 489 IPR001736 GO:0003824
Lapu7g00404 1059 Pfam Phospholipase D Active site motif 462 489 IPR001736 GO:0003824
Lapu7g00404 1059 CDD PLDc_vPLD1_2_yPLD_like_1 355 500 - -
Lapu7g00404 1059 SMART PH_update 202 329 IPR001849 -
Lapu7g00404 1059 PANTHER PHOSPHOLIPASE D 154 1043 IPR015679 -
Lapu7g00404 1059 PIRSF PLD_euk 12 1059 IPR016555 GO:0004630|GO:0006654|GO:0048017
Lapu7g00404 1059 SMART pld_4 855 882 IPR001736 GO:0003824
Lapu7g00404 1059 SMART pld_4 462 489 IPR001736 GO:0003824
Lapu7g00404 1059 CDD PLDc_vPLD1_2_yPLD_like_2 715 899 - -
Lapu7g00404 1059 SUPERFAMILY Phospholipase D/nuclease 694 905 - -
Lapu7g00404 1059 CDD PH_PLD 179 325 - -
Lapu7g00404 1059 Pfam PLD-like domain 728 902 IPR025202 -
Lapu7g00404 1059 ProSiteProfiles PH domain profile. 201 327 IPR001849 -
Lapu7g00404 1059 MobiDBLite consensus disorder prediction 597 625 - -
Lapu7g00404 1059 Gene3D - 200 331 IPR011993 -
Lapu7g00404 1059 SUPERFAMILY Phospholipase D/nuclease 316 582 - -
Lapu7g00404 1059 SUPERFAMILY PH domain-like 234 331 - -
Lapu7g00404 1059 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 855 882 IPR001736 GO:0003824
Lapu7g00404 1059 MobiDBLite consensus disorder prediction 597 616 - -
Lapu7g00404 1059 FunFam Phospholipase 689 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00404 Lapu-Chr7 4751687 4767701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00404 28 1059 Phospholipase D Gene Family (Wang group) AT3G05630 64.909 0.0 1367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00404 K01115 - gmx:100796914 1953.33