Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00401 ATGAAGACCTGGACCACCTTCTACACCCTTGTTTTCTTCTTCATCTTCTTCCTTTCTTCCTCTTATGCAGCTTTCTCCTCCTCCTCTGATACCACATGCAACACTACACCCTACCCAGCATTCTGCAAAACCACTCTACCTCCTCAATATTTATCCATACACCACCAATGCCGTTTCGTCCTTCAGCAATCCTTATCAACAACAAAAACCATTGCTGCATTGATCTCTTCTTATCTCAGAAACCACTACGCCATTCCTGGTTCAACTGTACACGCCCTTGAAGATTGCTTCAATCTTTCAGAACTCAACATTGATTTCTTGTCCAATGTCCTCCAAACCATTGAAAACACCGTGACTGGCTACCAAGTCTACGACTTGCAAACCTTGCTTAGTGCCATTTTAACCAACCAACAGACATGCTTGAATGGTTTTAACGAGGCAACTCCCTATCCTGTAGTTACCAGTGCCTTATCAAGTCCCCTTTCTGATGCGACCAAACTATATAGCATATCTCTAGCCCTTTTCACCCGTGGTTGGGTTAGTGATGCCATGGAAGGATCAACCGCCGTTGAGACTATTACTAATAGAAAATTACTGCAAACAAGCCTTAACAATGTGGAGGTGAGGCAAAAAGTGGTGGTGAACCCTGATGGGTCTGGTGATTTCACCACCATAAATGATGCAGTGGCTGCTGCACCTGACAACACCGGCACCAACAACGGGTACCATGTAATCTATGTTGTCACAGGGATTTACAATGAGTACGTGTCTATTCCTAAGAGCAAGCAGAACCTGATGATGGTTGGAGATGGCATCAACCGCACTGTGCTCACTGGCGATCGCAGCGTGGTAGATGGCTGGACCACTTTCCAATCTGCGACTTTTGCTGTTGTTGGAAAAGGGTTTGTTGCTGTGAACATAACATTTCGTAACACTGCTGGGTCAAGCAAGCATCAAGCTGTGGCTGTGAGAAACGGGGCGGACATGTCCACGTTCTATAATTGCAGTTTTGAGGGTTACCAAGACACACTGTACGTACATTCACTAAGGCAATTCTACAAAAGCTGTGACATTTATGGCACTGTGGACTTTATATTCGGCAATGCAGCAACAGTGTTCCAGGATTGTAGCATGTATCCAAGACTTCCTATGGAAAACCAATTCAATGCAATCACAGCACAAGGCCGAACAGATCCAAACCAAAACACCGGCATCTCCATCCAGAACTGTTGCATAATAGCAGCAAGCGAGTTGGATGATGCTAGCAGCAATTATAATGGGATAAAGACATATTTGGGTAGGCCTTGGAAGGAGTATTCTAGGACTGTTTACATACAATCTTTCATGGATGGCCTGATTGATCCAAAGGGGTGGAGAGAATGGTCAGGGGATTTTGCTTTGAGCACACTGTATTATGCAGAGTTTGCTAACTGGGGACCTGGTTCAAACACGAGCAATAGGGTCACATGGGAAGGGTACCATCTCATAGACGAAAAGGATGCACATGATTTCACGGTACACAAGTTTATTCAGGGTGACAAATGGCTACCCATCACAGGAGTACCTTTCAAAGCTAGCTTACAGTAA 1587 0.4486 MKTWTTFYTLVFFFIFFLSSSYAAFSSSSDTTCNTTPYPAFCKTTLPPQYLSIHHQCRFVLQQSLSTTKTIAALISSYLRNHYAIPGSTVHALEDCFNLSELNIDFLSNVLQTIENTVTGYQVYDLQTLLSAILTNQQTCLNGFNEATPYPVVTSALSSPLSDATKLYSISLALFTRGWVSDAMEGSTAVETITNRKLLQTSLNNVEVRQKVVVNPDGSGDFTTINDAVAAAPDNTGTNNGYHVIYVVTGIYNEYVSIPKSKQNLMMVGDGINRTVLTGDRSVVDGWTTFQSATFAVVGKGFVAVNITFRNTAGSSKHQAVAVRNGADMSTFYNCSFEGYQDTLYVHSLRQFYKSCDIYGTVDFIFGNAATVFQDCSMYPRLPMENQFNAITAQGRTDPNQNTGISIQNCCIIAASELDDASSNYNGIKTYLGRPWKEYSRTVYIQSFMDGLIDPKGWREWSGDFALSTLYYAEFANWGPGSNTSNRVTWEGYHLIDEKDAHDFTVHKFIQGDKWLPITGVPFKASLQ* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00401 528 Pfam Plant invertase/pectin methylesterase inhibitor 30 174 IPR006501 GO:0004857
Lapu7g00401 528 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 177 IPR035513 -
Lapu7g00401 528 Pfam Pectinesterase 212 513 IPR000070 GO:0030599|GO:0042545
Lapu7g00401 528 Gene3D - 205 527 IPR012334 -
Lapu7g00401 528 NCBIfam pectinesterase inhibitor domain 7 175 IPR006501 GO:0004857
Lapu7g00401 528 CDD PMEI-like_3 31 179 - -
Lapu7g00401 528 PANTHER PECTINESTERASE 15 517 - -
Lapu7g00401 528 SMART PMEI_2 24 174 IPR006501 GO:0004857
Lapu7g00401 528 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 177 IPR035513 -
Lapu7g00401 528 ProSitePatterns Pectinesterase signature 2. 358 367 IPR033131 -
Lapu7g00401 528 FunFam Pectinesterase 205 527 - -
Lapu7g00401 528 SUPERFAMILY Pectin lyase-like 212 524 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00401 Lapu-Chr7 4730102 4732046 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00401 10 527 Carbohydrate Esterase AT4G02330 51.852 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00401 K01051 - gmx:100810329 882.093