Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00373 ATGGCTGATTTTATGACCTCTACTCATCGAGTGAAGTGGATTTTCTCCCCTCAACAGCTGGTTGAGAAATATAAAGCAGCTAATCAGAGAGCCAAACAAATTCTAGAGAAGTATGGTGCAACTCTAATGGAAGTAGATGTTGATGGGTCATTGTCATATCCTGAATCCCAGATGACTGCAAAGGACAGTGGTGAGAAGCATTCTCGGACAAAACCTCTCAGTATTGAAGAAGAACAATGTATACGGGTATTTTATGAAAACAAGCTACAAGAAGTATGTAATAATTTCCGCTTCCCTCATAAAATCCAGGCAACAGCCCTTATATATTTTAAAAGATTCTATCTGCAGTGGTCGGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCATATATGCTGCTTGTAAGATAGAAGAAAACCATGTGTCGGCTGAGGAGCTTGGTAAGGGGATCTCACAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTAATTGTTTATGCACCATATCGCTCTGTTGAAGGTTTTATAAATGATATGGAGGAATTTTGCAATGCTGGTGATGATCAGCTTCAAATGCTCAAGACTTTGCAAGAGACAGCAAGATTGGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTCTGGGTAACTCAAATGCACTGCACAAAGTCATTGACTTCGATAGTTATCTTGGGAGCATTTTTTCCCGTCAGAATTCCTTGCATACAATGGCCGAGCTTGCTGAATCACTACATGCTATTGATTCTTGTATTAAAAAATACAAAATTCCTTCTGAGAAAGAATTGAAGCATATCAACCGAAAACTGAAGTCTTGTTGGGGTCATAGCTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAGTCCAAAAGGAGCTCAAATGAAGCACAAAATATGCCATCTCTTGTCTAG 1008 0.3948 MADFMTSTHRVKWIFSPQQLVEKYKAANQRAKQILEKYGATLMEVDVDGSLSYPESQMTAKDSGEKHSRTKPLSIEEEQCIRVFYENKLQEVCNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCIYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFINDMEEFCNAGDDQLQMLKTLQETARLEVDKMMLTDAPLLFPPGQLALAALGNSNALHKVIDFDSYLGSIFSRQNSLHTMAELAESLHAIDSCIKKYKIPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSKRSSNEAQNMPSLV* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00373 335 FunFam cyclin-H1-1 63 175 - -
Lapu7g00373 335 CDD CYCLIN_AcCycH_rpt1 3 174 - -
Lapu7g00373 335 Gene3D - 177 282 - -
Lapu7g00373 335 MobiDBLite consensus disorder prediction 301 335 - -
Lapu7g00373 335 Pfam Cyclin, N-terminal domain 82 174 IPR006671 -
Lapu7g00373 335 FunFam Cyclin h 177 282 - -
Lapu7g00373 335 SUPERFAMILY Cyclin-like 66 176 IPR036915 -
Lapu7g00373 335 SMART cyclin_7 87 168 IPR013763 -
Lapu7g00373 335 Pfam Cyclin C-terminal domain 179 279 IPR031658 -
Lapu7g00373 335 PANTHER CYCLIN 64 325 IPR043198 GO:0006357|GO:0016538
Lapu7g00373 335 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Lapu7g00373 335 Gene3D - 63 175 - -
Lapu7g00373 335 CDD CYCLIN_AcCycH_rpt2 177 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00373 Lapu-Chr7 4492297 4498289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00373 1 280 Core Cell Cycle Gene Families AT5G27620 64.643 2.73e-133 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00373 K06634 - gmx:547736 600.127