Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00371 ATGGCACCAACAAGGAAATCAAGAAGTGTTAATAAGCGGATTTCAAGTTCGAATGATGTTTCTCCAGAGAAAGATGGAGTAAATTCAGTTAAAAGCAAGCAACGGAAGAAAAAGTTGACTGATAAATTGGGATCTCAGTGGAGCAAGGAGGAACTAGAGCGGTTTTATGAAGCATATAGAATGTATGGGAAAGACTGGAAGAAGGTGGCTGGTGTTGTACGGAATAGAACATTTGAAATGGTAGAAGCTCTTTACAATATGAATCGGGCATACCTCTCTCTGCCAGAGGGCACGGCTTCTGTTGTTGGCCTCATAGCAATGATGACTGATCACTACAATGTGCTGGAAGAGAGTGACAGTGAAAGGGAGAGCAATGATGCACTAGGATCTCGGAAATTTGTAAAACGAAAGCGGGAAAAAGTTCAGCTTAGTGTTTCTAAAGATCAGTCTCATTCAATTGCTTCCAGTGATGGTTGCCTCTCTCTATTGAAGAAGAGACGCTTAGATGGTATTGTGCCTCATGCTGTTGGTAAAAGGACTCCTCGCATCCCAGTTTCTTATTCTTATAAGAAAGATTATACAGAAAATTATGCTTCACCTTATAGAAGAAGCCTGAAGGCAACTACTGATGCTAATGATGATGAAGTTGCACATGTTGTAGCTTTGGCCTTAACTGAGGCTGCACAAAGAGGAGGCTCTCCCCAAGTTTCTCAATCACCATGTAGAAGAGTAGAGCAAAAACCCTCACCTGTCCAGCGCTGGGAAAGAAAGCAGCAAGTATCGGAGGCATCTCGTGCCAAGTTTCATGATCTTTCAATGGATGAGGAGTTATTGGACGGTAGTATAGAAAGCAGGGGAGCTGACAATGGAGAATATGCAAGAGATAATAGTTCATTAATGGATATGGAAGGCATAGGCACAGTTGAAGTTCTTCAAAAGGGGGGGAAATTTTACAGAAAGAGAGAGAGAGTGAAAAATGTTGGAAACCATCAGCTTGATGATGGTGGGGAAGCATGTAGCGGCACTGAAGAAGGGCTTAGTTTTAGTTCACTAAAGGAAAAGGTTGATGTTGAGGTTACTAATGATAAGCTTGAAAAAAGTTCTCCAAAAGGTGGGAGGAAACGAAACAAGAAACTCTTCTTTGGAGATGAAACCCCTGGCTTGAATGCGTTGCAAACTTTGGCAGATCTATCTCTAATGATGCCAATATCTACAATAGATTCTGAATCGTCTATCCAATTGAAGGGAAACAGAATTTCTGCTGATAAAGACGGTAAGTCTGCTTTACCTGAAGCAGCATCAACAAGCCATAAGAGACATAAACTTAAACACAGTTTGGTCCCTGAAGTTGAGGTTTCAGCATCCAAAAAGTCCAAGCTTGGAAAGGAATCGACAAAGGATACTAATGTGCTCTCTGAATCAAAAGAACAACTTCCTTTTGCTTATGCATCATGGAAAAGAAAGCGGAAGTCTATGGTTTCGAAGGTTGCAAATGCAAAGCTTGATTCTTTTCCAATTGGTCCCTTGAAAGATGAGGCTTTAGATGACGAGAAGAAACCAGTGGTTAAAGGAAAACATGTTGATGAGGTTTTTACCCTACCAAAGCAATTGAAGACAGTTAAATCATTAGAGAGTTCTCTGTGTAGTGATAAGAAAGATTTGACAGTATCAATGGTAGAAATTCCACTTTTGAAAGAAGATAGTTTACCAACTAAAAGAAGCAGACGGAAGATGACTTTACAACGAACTTCCTTTGCTAAGGAAAAGTCTTCTAATTGCTTGTTGAAGAGTCAACCAAACAAGCACTTTGCTACGAAGGAAAAGCTTTCTAGTTGCTTGTCATCTAATATGGTTCGCAGATGGTTTATTTTTGAATGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTGATGGAATACTTAAATCATGTTGGACTCGGGAATATCCCAAGGTTAACTCGCGTTGAGTGGAGTGTTGTAAGAGGTTCCCTTGGCAAACCCCGGCGGCTTTCTGAACATTTTCTTCGTGATGAAAGGCAAAAACTTGAAGAGTATCGGGAATCAGTGAGAAAGCATTATGCTGAACTGCGGACTGGTATTAGGGATGGACTTCCAACTGATTTAGCTAGACCATTATGTGTTGGACAGAGAGTAATTGCTGTTCATCCAAAAACAAGAGAGATTCATGATGGTAGTGTGCTTACCGTTGATTATGACAAGTGCAGGATTCAGTTTGACCTTCCTGAATTAGGTGTTGAGTTTGTAAAGGACATTGATTGTATGCCTTTCAATCCATTAGATAATATGCCAGAAGCCCTGAGGAGGCATATTGATGCCAGAAAAGGCTCTTTTATGCCTATGGAACCACAGATTAATGGAAATTCCAATTTTGGGGGGTGCGAAAATCATTCTTCACCTGTGAAGGGTAAGGTTGCTACCGCCGATAACTTCTGTGCACAAGCAGGTTGTGTTCAACCATGTAAAGTGACAAACCATCAAGCTAAGGAAGCTGATATACATGCTCTTTCTGAACTAAAGCGTGCTCTAGATAAAAAGGAGACATTGTTGATGGAGCTTCGTAGTTCAAATAACGACATATTGGAGAACCAAAATGGCATAGAATGCTTAAACGATTCAGAGGTTTTCAAGAAGCATTATGCCACGGTACTGGTAGAGCTAAAGGAAGCCAGTGGACAGGTTTCTGATGCTATGGTGCAACTGAGGCAGCGCAATACATACAGAGGAAACTCTCTACCACCATGGATGAAGCAGCAAACAAGTTTCAATGTTCATGACGATCTTCCCAATATGTTGGATAGTTCTCATACACAAGAGTTAGGGTCAACTGTTGTTCAAATTATTAAAGGATCCAGGTTAAGGGCACATGCAATGGTAGATGCTGCATTTAAGGCATTGTCTTTGACAAAGGAAGGTGAAGATGCTTTCGTGAAGATTGGGCAAGCATTGGATTCTATTAATCATCAACAGTTGGCCTCCAAGTCTAGGTTATCTGTGATCAGGTCTCAAGAGCAAGTGAATGCAAATGGCAGTTTTTATCATCTTAATCATTCAACTTGCAGTGAGTCTGTACTTAATGATCCATCTGGTCCAAGACTGCATAATTATTCGGACAAATTTGAGACTGAACTTCCGTCAGATCTTATCACTTCATGTGTCGCTACATTAATCATGATTCAGACTTGTACTGAACGGCAATACCCTCCAGCTGAAGTGGCTCAGATATTAGATTCTGCCGTTAGCAGCCTGCATCCGTGCTGTCCCCAAAACCTTCCTATTTATAGAGAAATTCAAATGTGCATGGGAAGAATCAAAACACAGATTTTAGCTCTCATCCCTACTTAA 3375 0.4071 MAPTRKSRSVNKRISSSNDVSPEKDGVNSVKSKQRKKKLTDKLGSQWSKEELERFYEAYRMYGKDWKKVAGVVRNRTFEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEESDSERESNDALGSRKFVKRKREKVQLSVSKDQSHSIASSDGCLSLLKKRRLDGIVPHAVGKRTPRIPVSYSYKKDYTENYASPYRRSLKATTDANDDEVAHVVALALTEAAQRGGSPQVSQSPCRRVEQKPSPVQRWERKQQVSEASRAKFHDLSMDEELLDGSIESRGADNGEYARDNSSLMDMEGIGTVEVLQKGGKFYRKRERVKNVGNHQLDDGGEACSGTEEGLSFSSLKEKVDVEVTNDKLEKSSPKGGRKRNKKLFFGDETPGLNALQTLADLSLMMPISTIDSESSIQLKGNRISADKDGKSALPEAASTSHKRHKLKHSLVPEVEVSASKKSKLGKESTKDTNVLSESKEQLPFAYASWKRKRKSMVSKVANAKLDSFPIGPLKDEALDDEKKPVVKGKHVDEVFTLPKQLKTVKSLESSLCSDKKDLTVSMVEIPLLKEDSLPTKRSRRKMTLQRTSFAKEKSSNCLLKSQPNKHFATKEKLSSCLSSNMVRRWFIFEWFYSAIDYPWFAKRELMEYLNHVGLGNIPRLTRVEWSVVRGSLGKPRRLSEHFLRDERQKLEEYRESVRKHYAELRTGIRDGLPTDLARPLCVGQRVIAVHPKTREIHDGSVLTVDYDKCRIQFDLPELGVEFVKDIDCMPFNPLDNMPEALRRHIDARKGSFMPMEPQINGNSNFGGCENHSSPVKGKVATADNFCAQAGCVQPCKVTNHQAKEADIHALSELKRALDKKETLLMELRSSNNDILENQNGIECLNDSEVFKKHYATVLVELKEASGQVSDAMVQLRQRNTYRGNSLPPWMKQQTSFNVHDDLPNMLDSSHTQELGSTVVQIIKGSRLRAHAMVDAAFKALSLTKEGEDAFVKIGQALDSINHQQLASKSRLSVIRSQEQVNANGSFYHLNHSTCSESVLNDPSGPRLHNYSDKFETELPSDLITSCVATLIMIQTCTERQYPPAEVAQILDSAVSSLHPCCPQNLPIYREIQMCMGRIKTQILALIPT* 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 230 261 - -
Lapu7g00371 1124 Pfam DIRP 626 727 IPR033471 -
Lapu7g00371 1124 Coils Coil 846 869 - -
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 360 382 - -
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 26 43 - -
Lapu7g00371 1124 FunFam Protein ALWAYS EARLY 3 isoform A 3 99 - -
Lapu7g00371 1124 PANTHER LIN-9 1 1124 IPR010561 GO:0006351|GO:0017053
Lapu7g00371 1124 CDD SANT 47 77 IPR001005 -
Lapu7g00371 1124 Pfam Myb-like DNA-binding domain 45 79 IPR001005 -
Lapu7g00371 1124 SMART sant 43 91 IPR001005 -
Lapu7g00371 1124 Gene3D - 2 99 - -
Lapu7g00371 1124 ProSiteProfiles SANT domain profile. 42 77 IPR017884 -
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 452 471 - -
Lapu7g00371 1124 SMART DIRP_2 627 728 IPR033471 -
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 230 245 - -
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 455 470 - -
Lapu7g00371 1124 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 77 IPR017930 -
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 1 43 - -
Lapu7g00371 1124 Coils Coil 679 699 - -
Lapu7g00371 1124 SUPERFAMILY Homeodomain-like 40 90 IPR009057 -
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 1 25 - -
Lapu7g00371 1124 MobiDBLite consensus disorder prediction 417 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00371 Lapu-Chr7 4456938 4471825 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu7g00371 DIRP 1.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00371 - - gmx:100816217 1873.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00371 7 4456938 4471825 Lapu7g00371 7 4456938 4471825 ECH