Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00350 ATGGAAGTTAATACTACAACCACTGTACCTGCAGGGCCACCAACTAAGAACCATTCTTTCACACAGCACAGCTTACATTCACAAAGACATTCTCACACCCGTACTCATACCCATTTCCCCTCCAAAACCATTCTCATAACCATCTCATTGGCTACCTTAGTTACGCTCCTATTTGTCATTTTTGTGGTCCTGTTCTTGATCCGTCGCCAAAAATCTTCAAGCAAAAATGGAACTTGCAAAGAAGACAGCAGAGAGCTTCATGACACAAGCAGCAGGCTCATTACTTCATCAACGCTGAATTCTAGCCCAGAAGTGAAGAGTGGGTGTCTTCACGGGGGAAATTTGAGCAGGACCCCAGCACCTACATTTCGAGGAGTCCAAGTGTTCACGTACAGGGAATTAGAAATTGCTACAGATGGATTCAGTGAAAGAAATGTGATTGGCAGTAATGGAAGGCATGGCCTGATGTATAGAGGAGTTCTGAGTGATGGCACTTTGGCAGCAATTAAGTTGCTTCGCAGCGAGGGTAAGCAAGGGGAGCGTGCCTTCAGAATTGAGGTCGATCTCCTAAGTCGCTTGCACTCTCCATATTTGGTGGAGTTACTTGGCTATTGCGCTGACCAACACCACAGGTTATTAGTTTTTGAATACATGCCCAGTGGTACACTCCACCACCATCTTCACTCCCCCAACGATCAAACTCAACCGTTGGATTGGTGGGCCCGGATGAGGATAGCCCTTGATTGTGCCAGGGCACTGGAATTCCTTCATGAACATGCAGTCTCTCCTGTGATCCACAGAGACTTCAAGAGTAACAACGTTTTACTGGATCAAAATTTCCGTGCCAAGGTGTCTGATTTTGGATTGGCAAAGATGGGATCAGAGAAGAGGAACGGTCAGGTTTTCACCCGTGTGTCGGGGACCACTGGATATCTGGCACCAGAGTACGCCACGGGTAAACTTACCACAAAGTCGGATGTTTACAGCTATGGTGTGGTTCTTCTCGAACTGCTCACGGGACGTGTGCCTGTTGATATCAAGCGGGCCCCGGGAGAACACATCCTTGTCTCTTGGGCTCTTCCAAGGTTGACAAACAGAGAAAAGGTGATTGAAATGGTTGACCCAGCTCTACGCGGACAGTACTCAAAGAAGGATTTAATTCAGATAGCTGCCATTGCAGCAATGTGCATACAGCCAGAAGCTGATTACAGGCCGCTCATGACAGATGTTGTACAATCACTGATACCGCTTGTTAGGAACCCATCCTCTCTTGGTTCTAGCTCCCTACGATTTCAGAAACAAACGCAAAGTCCAAGTCAATAG 1323 0.4717 MEVNTTTTVPAGPPTKNHSFTQHSLHSQRHSHTRTHTHFPSKTILITISLATLVTLLFVIFVVLFLIRRQKSSSKNGTCKEDSRELHDTSSRLITSSTLNSSPEVKSGCLHGGNLSRTPAPTFRGVQVFTYRELEIATDGFSERNVIGSNGRHGLMYRGVLSDGTLAAIKLLRSEGKQGERAFRIEVDLLSRLHSPYLVELLGYCADQHHRLLVFEYMPSGTLHHHLHSPNDQTQPLDWWARMRIALDCARALEFLHEHAVSPVIHRDFKSNNVLLDQNFRAKVSDFGLAKMGSEKRNGQVFTRVSGTTGYLAPEYATGKLTTKSDVYSYGVVLLELLTGRVPVDIKRAPGEHILVSWALPRLTNREKVIEMVDPALRGQYSKKDLIQIAAIAAMCIQPEADYRPLMTDVVQSLIPLVRNPSSLGSSSLRFQKQTQSPSQ* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00350 440 ProSiteProfiles Protein kinase domain profile. 142 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00350 440 CDD STKc_IRAK 147 417 - -
Lapu7g00350 440 Pfam Protein tyrosine and serine/threonine kinase 150 414 IPR001245 GO:0004672|GO:0006468
Lapu7g00350 440 MobiDBLite consensus disorder prediction 74 89 - -
Lapu7g00350 440 SUPERFAMILY Protein kinase-like (PK-like) 121 414 IPR011009 -
Lapu7g00350 440 FunFam Serine/threonine-protein kinase PBS1 109 217 - -
Lapu7g00350 440 MobiDBLite consensus disorder prediction 90 106 - -
Lapu7g00350 440 MobiDBLite consensus disorder prediction 1 29 - -
Lapu7g00350 440 PANTHER OS01G0750732 PROTEIN 21 421 - -
Lapu7g00350 440 Gene3D Transferase(Phosphotransferase) domain 1 218 426 - -
Lapu7g00350 440 MobiDBLite consensus disorder prediction 1 22 - -
Lapu7g00350 440 Gene3D Phosphorylase Kinase; domain 1 114 217 - -
Lapu7g00350 440 ProSitePatterns Serine/Threonine protein kinases active-site signature. 264 276 IPR008271 GO:0004672|GO:0006468
Lapu7g00350 440 FunFam Receptor-like serine/threonine-protein kinase ALE2 218 435 - -
Lapu7g00350 440 MobiDBLite consensus disorder prediction 74 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00350 Lapu-Chr7 4320777 4324291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00350 109 440 Receptor kinase-like Gene Family AT3G58690 60.704 6.69e-147 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lapu7g00350 PK_Tyr_Ser-Thr 5.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00350 - - gmx:100809810 756.518