Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00347 ATGTGTTTGCCCGAGGGAGAGAGAGACAGAGAGAGAGCCATGGCACTGGAAGCAGTGGTGTTTCCACAATCACAGGACCCATTTGGTGGTTACGGTTCAGTTAAGGACTTCTACAACTGCACCTTCTTGGCTGCTTCTTCACCCGGCTGGGGGGACTATGAACACATCAACATCAACATCAACAAAGAAGAAGAACAAGGTTCTATCTCTACTTTTCTCGATAATAGTAGCAACCAACCGGACAATTACCCTTATGGAGGAGATTGGACCAGCTCCTCCTCCTCTATCTTACCCCACTTCAATGAACTTCATGAGACCACTGACCCCAGTAACAGCACTCAAACCTTGGATACCTTAACCACTCGTCCCAAGAGGCGCAGAGCCAAAAGCAGAAAGAACAAGGAAGAAATTGAGAACCAGAGAATGACTCACATTGCTGTGGAGCGCAATAGAAGAAAGCAGATGAACGAGTATCTTTCTGTTCTTCGCTCTCTCATGCCAGACTCTTATATCCAAAGGGAGCTTGAGCAGAGGCTGCATTTTCTTGGTGCTCAGAAACAAGGAGAGGGTAAATCTGATGCTGCTGGTGCAACAAACATGCCCTTTTCTGAGTTCTTCGCCTTTCCGCAGTATTCAGCAAGTGGCGGTGGTGGCTCTGATAATTCTGCAACCATAGGTGAAGACGTGGGTGAAGTTAAGTCTGGCATTGCTGACATAGAAGTGACCATGGTGGAAAGCCATGCAAATCTCAAAATAAGATCCAAGAGGCGCCCCAAGCAACTCTTGAAGTTGGTCTCTGGTTTGCATACTATGCGCCTCACAATCTTGCACCTAAATGTTACTACCACCGGTGAAGTTGTTCTCTACTCTTTAAGTGTTAAGGTAGAAGATGATTGCAAGTTGGGATCCGTTGATGATATAGCTGAAGCTGTGTACCAGACGCTGGATAGGATTCAGCAAGAGGCATGCTTGGTCAATTTTGCCCACCTTGCTTTGAAATTGGTGGGTCTTGTCTACCTCAGCTATAAGCCAAAGCCAAATTGTCAAGCAGAAATTGAGAGCATCTCAAAATAA 1074 0.4609 MCLPEGERDRERAMALEAVVFPQSQDPFGGYGSVKDFYNCTFLAASSPGWGDYEHINININKEEEQGSISTFLDNSSNQPDNYPYGGDWTSSSSSILPHFNELHETTDPSNSTQTLDTLTTRPKRRRAKSRKNKEEIENQRMTHIAVERNRRKQMNEYLSVLRSLMPDSYIQRELEQRLHFLGAQKQGEGKSDAAGATNMPFSEFFAFPQYSASGGGGSDNSATIGEDVGEVKSGIADIEVTMVESHANLKIRSKRRPKQLLKLVSGLHTMRLTILHLNVTTTGEVVLYSLSVKVEDDCKLGSVDDIAEAVYQTLDRIQQEACLVNFAHLALKLVGLVYLSYKPKPNCQAEIESISK* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00347 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 191 IPR011598 GO:0046983
Lapu7g00347 357 PANTHER MAX DIMERIZATION, MAD 92 323 - -
Lapu7g00347 357 Gene3D - 133 187 IPR036638 GO:0046983
Lapu7g00347 357 MobiDBLite consensus disorder prediction 102 119 - -
Lapu7g00347 357 MobiDBLite consensus disorder prediction 102 135 - -
Lapu7g00347 357 Pfam Helix-loop-helix DNA-binding domain 140 171 IPR011598 GO:0046983
Lapu7g00347 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 176 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00347 Lapu-Chr7 4271955 4273747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00347 14 295 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 44.551 1.86e-58 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lapu7g00347 HLH 2.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00347 - - pvu:PHAVU_007G181900g 573.163