Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00345 ATGCTCGCAATGGCTTTGTTGCTGCCACCGCTCCTTTTTTCAACTTCCTATCTGAGCACAAGCACCATTGTAGCTCTCTGTGTATTCTTCGCTCTCCTAGTCACTTGTGTAATCATTGGCCATCTTCTGGAAGAGAATCGGTGGGCTAATGAATCCATCATTGCCCTCCTTCTGGGGTTGTGTGCTGGAACGGTGGTGTTGTTTGTGACTAACTTTCAAAGTGCCAACATTTTAATATTCAGTGAAGACTTGTTCTTTCTTTACTTGCTTCCCCCGATCATTTTCAATGCCGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAAGAATTTCACCATTATACTGCTCTTTGGAGTCATTGGAACAGTTATTTCATTCTGTCTGATATCTGTTGGTGCCCTTATGCTCATTCAGTGGATTGGAATAGCTAACCTTGGAATAAAAGATTACCTTGCCATCGGTGCCATATTGTCAGCAACGGACTCAGTTTGTACATTGCAGGTTCTCAATCAAGATGAAACACCATTGCTTTACAGCATTGTATTTGGGGAGGGAGTTGTAAATGATGCCACGTCGATTGTGCTTTTCAATTCGGTCCAATCCCTTGACTTCAGCAGCACCTATTCTATGACAGCCTTGAAATTGTTGGGGACCTTCCTATACCTCTTCTGCACTAGTACAGCCCTTGGCATAGTAGTTGGCCTTTTAAGTGCTTATATTATGAAAACACTCTACCTAGGGAGGCATTCTACTGATCGTGAACTTGCACTTATGATGTTGTTGGCATATTTGTCCTACATGATCGCTGAGCTTTTGAGTCTCAGTGGGATATTGACTATTTTCTTCTGTGGCATTGTTATGTCACACTACACTTGGCACAATGTTACATTAAGCTCAAGGACAACAACCAAGCACGCCTTTGCAACCCTCTCATTCATTGCTGAAACCTTTATATTTATATGTGTTGGCATGGATGCTTTAGACATCGACAAATGGAAAAGCAGCAAAGGCAGCAGTACAGGAACTTCAGTTGCTGTGAGTTTAACTTTGTTTGCATTAGTGTTGATTGGAAGAGCAGCTTTTGTGTTCCCTATTGCATATATTAAAAATCGCATCAACACAAGAGATAGTACCAAAATTGAATTTCGTTCACAGTTTATCATATGGTGGGCTGGCCTGATGAGAGGTGCAGTGACTATTGCCCTATCTTATAACCAGTTTGCAGAAGCCCAGAGTACATCATCAAGTCAAGACTCTGCATTAATGATCACCTCTACTATAATTGTGGTCTTATTCAGCACTGTGGTATTCGGCTCCATTACTAAGCCACTGATAGAGGCTGTGCAACCAAGGCATCCGAAACCAAGCAGTTTTGATTCCGCTGATAACGAGGAAGATTTGAGATTCCTATTGCTTGAAAACAATGTTCCCATTAACCAAAACAACAATCAGCCATTTCAAAGGCAAAGTAGGATAAGTATGCTAATAAGTCATCCAAGCAAAACTGTTCACTACTTTTGGAGGAAATTTGATGACAAGTTTATGAGACCTGTGTTTGGTGGAAGGGGTTTTGTGCCATTTGTTTCTGGCGAAGCAGGGGAGATTTTTTGA 1608 0.4148 MLAMALLLPPLLFSTSYLSTSTIVALCVFFALLVTCVIIGHLLEENRWANESIIALLLGLCAGTVVLFVTNFQSANILIFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTIILLFGVIGTVISFCLISVGALMLIQWIGIANLGIKDYLAIGAILSATDSVCTLQVLNQDETPLLYSIVFGEGVVNDATSIVLFNSVQSLDFSSTYSMTALKLLGTFLYLFCTSTALGIVVGLLSAYIMKTLYLGRHSTDRELALMMLLAYLSYMIAELLSLSGILTIFFCGIVMSHYTWHNVTLSSRTTTKHAFATLSFIAETFIFICVGMDALDIDKWKSSKGSSTGTSVAVSLTLFALVLIGRAAFVFPIAYIKNRINTRDSTKIEFRSQFIIWWAGLMRGAVTIALSYNQFAEAQSTSSSQDSALMITSTIIVVLFSTVVFGSITKPLIEAVQPRHPKPSSFDSADNEEDLRFLLLENNVPINQNNNQPFQRQSRISMLISHPSKTVHYFWRKFDDKFMRPVFGGRGFVPFVSGEAGEIF* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00345 535 PANTHER SODIUM/HYDROGEN EXCHANGER 27 518 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Lapu7g00345 535 Pfam Sodium/hydrogen exchanger family 30 445 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu7g00345 535 Gene3D - 145 197 - -
Lapu7g00345 535 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu7g00345 535 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu7g00345 535 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu7g00345 535 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu7g00345 535 NCBIfam sodium/hydrogen exchanger 3 25 452 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00345 Lapu-Chr7 4251326 4257199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00345 18 533 Antiporters AT5G27150 60.962 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00345 K14724 - qsu:112009828 732.635