Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00332 ATGGAGTGCAACAAAGATGAGGCTTTGAGGGCTAGAAAAATTGCTGAAGCTAGAATGCAAAGAGGTGAATTTCTAGAAGCTCTCAAGTTTGCCACCAAGGCCAAAAACCTTTATGCTGATGTGGGAAACATTAACCATGTTCTTACGATTTGTGAGGTTCACAATGCTGCACAGAAGAAACTTTCTCCCTCTGACATGGACTGGTATGCGATTCTTCAGATTGAAAGATTGGCAGATGAAACAGCTATAAAGAAACAGTACAGGAGGCTTGCACTCTTACTTCATCCTGATAAGAATAAGTTTGCTGGTGCAGAAACTGCTTTCAAATTGGTTGGGCAAGCCAATGGGGTTTTGAGTGACCAAGCAAAACGTTCTTTGTATGACAAGAAGTTTGCAGTATCTGTGAGAGGCCCTGTGCCGAAATCCAGCGATTCCAAGAAGAAAGCTGGACAGAAGACATTCTGGACATGTTGCCAACATTGTAATACTAAATACCAGTACTGCATGCCATTTGTGAATGCAACCATACGCTGTAAACAGTGTTTGAAGTCCTTTAAAGCTCGTGCTATTCCTTTGGTAAATATCCAGAAGGAGTCTCCAACGCATGGCCCCCCAAAACCAGCCTCTGAAAGTACTGGTGGAAAACCCCCTGGTGGAGCAGAGCATGCTAGTACATCTGTGAGGCCAAATCCTATGTCTATGAAAAAATGTTCTTCTGGCGTTGGTGGTCATTCTGAAGGTGAAAAGAGTAAAACTGGCTGTGTCCCTGCATCCACAGGCGCGGAGTCACAAACCTCTAAAAATGTTGGAAGTAAAAGAGTTAGGCACTCAACACCAGATTCAGGAGAAAGTTTCGAAGCTGGTAATGGTTATGAGATGAAAGATGCCTCTTATGTTCGAGAAAATGATATTGATTCTTCAAGACTTGATGCAGGGAGGTCTTGTAGACAAAAGCAGCAGCAGCATGTTTAA 972 0.4311 MECNKDEALRARKIAEARMQRGEFLEALKFATKAKNLYADVGNINHVLTICEVHNAAQKKLSPSDMDWYAILQIERLADETAIKKQYRRLALLLHPDKNKFAGAETAFKLVGQANGVLSDQAKRSLYDKKFAVSVRGPVPKSSDSKKKAGQKTFWTCCQHCNTKYQYCMPFVNATIRCKQCLKSFKARAIPLVNIQKESPTHGPPKPASESTGGKPPGGAEHASTSVRPNPMSMKKCSSGVGGHSEGEKSKTGCVPASTGAESQTSKNVGSKRVRHSTPDSGESFEAGNGYEMKDASYVRENDIDSSRLDAGRSCRQKQQQHV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00332 323 MobiDBLite consensus disorder prediction 256 272 - -
Lapu7g00332 323 MobiDBLite consensus disorder prediction 296 317 - -
Lapu7g00332 323 Pfam DnaJ domain 67 128 IPR001623 -
Lapu7g00332 323 SUPERFAMILY Chaperone J-domain 63 132 IPR036869 -
Lapu7g00332 323 CDD DnaJ 67 120 IPR001623 -
Lapu7g00332 323 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lapu7g00332 323 PRINTS DnaJ domain signature 87 102 IPR001623 -
Lapu7g00332 323 PRINTS DnaJ domain signature 123 142 IPR001623 -
Lapu7g00332 323 PRINTS DnaJ domain signature 103 123 IPR001623 -
Lapu7g00332 323 MobiDBLite consensus disorder prediction 196 323 - -
Lapu7g00332 323 Gene3D DnaJ domain 64 168 IPR036869 -
Lapu7g00332 323 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Lapu7g00332 323 SMART dnaj_3 66 123 IPR001623 -
Lapu7g00332 323 PANTHER BNAC03G44070D PROTEIN 1 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00332 Lapu-Chr7 4156341 4158094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00332 4 191 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.010 1.41e-26 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00332 7 4156341 4158094 Lapu7g00332 7 4156341 4158094 ECH
Lapu6g02105 6 20744251 20750364 Lapu7g00332 7 4156341 4158094 PCT