Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00325 ATGGTTTTGAATGCTTTGCCGGTGCCTCGTTGCTTGCATCTTGTGGCGGTGACGGTGGTGGTTTTGGTCCTGTTACGCCGGATGCAGTGCCAGCAACTAAGCGACTTCGATAACCCTGTGATTATGCCACGTGTCACCAGTCTTGTGTATGCCCAAATCTCCAACATGACCTCGCTCCTCAATCACGAAATGAAAGCCAGAGCCAGTTTCTGTTTCAGAGATCCGGATGGTGATTGGAATAAAGCATTTAATTTTTCTTCTGATTTGGACTTTGTCTCTACTTGCATTCGGAAGACTAAAGGAGATATTTTGCAACGGTTGTGTACAGCAGCAGAAATAAAGTTTTACTTAAATAGCTTATTGGAGAGGTCTACGACTAGGAGCGCCAACTATTTAAAGCCTAACAAGAACTGCAATTTAAACTCATGGGTATCAGGTTGTGAGCCAGGATGGGCATGTAGTGTTTCCACAAGCCAGCAAGTTGATCTTAGAAATTCACAGGAGATACCTGCCAGAACTACAAACTGTGAAGCATGTTGTGAGGGGTTCTTCTGTCCTCACGGCATCACATGCATGATACCTTGCCCTCTAGGTTCTTATTGCCCTCTTGCTACACTCAATAGCACAACTGGTGTTTGTGAACCATATCTTTATCAACTGCCTCCAATGCAGCCAAATCATACCTGTGGAGGAGCAAACATTTGGGCTGATATTAGCAGCAGTAGTGAGATATTTTGTTCGGCAGGATCATATTGCTCCACAATTACCAATAGAACTCCTTGTAGTAGGGGGCATTACTGCAGGATGGGTTCTACATCTCAGCAAAGGTGCTTCAAGTTGAATTCATGTGATTCAAACTCCGTGACCCAAAATATGCATGCATATGGAATCATGCTCATTGTTGCTTTGAGTACTTTGTTACTCATTATCTACAGCTGTTCTGACCAAGTTCTGAGTACTAGGGAAAAGAGAATGGCTAAGTCCAGGGAAGCAGCATCCAGAAGTGTAAGAAAGATTGCAAATGCTCGCCAAAGATGGAAAGATGCAAAAGATGCTGCTAAGAAGGGTGCAAGTGAACTGCAAGCTCAACTATCACAAACATTTTCTCGGAACAAGGACTTTGTAGATCCGGAAGAAGTTAAAATTTTGAATCAACCAACTACTGAAACAAAGATTGAATTGTTTTCACATTCACGTCCTAGTACCTCACCTATGATTAGTAGGTCATCTGCTGGGCCAAAGAGAAAGGGAAAAGAACCCAGTGATCTGACGCAGAAAATGAATCAAATGGAAAATGAGGCAAATATTAGGAACAACGTTCTTTTTGAAACAGAAACTAGAGAAAAAAATGTTACGGCAAGAGTGCCTAAGGAAAAGCAACTGAATACGAATACCCAAATTTTTAAGTATGCATATGCTCAACTTGAGAAAGAAAAGGCTCAGCAACAAGAAAATATGAATCTTACCTTCTCAGGAGTAATTAGTATGGCTACCAAAAGTGAACAAAGAAAAAGGCCTTTAATTGAAATATCTTTCAAAGATCTATCTCTCACTTTGAAAGCACACAATAAACTTATATTAAGATGTGTTACAGGGAAAATTAAACCTGGACGCATCACTGCTGTTATGGGTCCATCAGGTGCTGGCAAGACAACTTTTCTATCAGCAATAGCTGGGAAGGCATTTGGATGCAAGGTGACTGGTTCCATTTTTGTAAATGGAAAGAATGAATCAATCCACTCCTATAAAAAAATTATTGGCTTTGTGCCACAAGATGACATAGTTCATGGAAACTTGACTGTGGAAGAAAACTTCCGGTTCAGTGCACTCTGCAGGCTACCTGCTGACTTGCCAAAACCAGAAAAAGTTCTGATTGTTGAAAGAGTTATTGAATTCTTGGGGCTTCAATCTGTGCGGAATTCTTTGGTTGGAACTGTAGAAAAGCGAGGCATCTCTGGAGGCCAAAGGAAACGTGTAAATGTTGGATTGGAAATGGTCATGGAACCTTCACTTCTGATCTTGGATGAACCCACTTCTGGGTTGGACAGTGCATCATCTCAACTCCTTCTTAGAGCACTAAGGCGGGAAGCTCTTGAAGGAGTGAACATTTGCATGGTGGTTCACCAACCCAGCTATGCTTTGTTTAATATGTTCGATGACTTGATACTCCTGGCAAAAGGTGGCCTTACTGTATATCATGGATCAGTCAAGAAAGTTGAAGAGTACTTTGCAGACCTTGGGATAAATATACCAAAGCGCATTAATCCTCCTGATCAATTCATTGACATTTTGGAGGGCATAGCAGTACCTAGTGGAAGTTCAGAAGTCAGTTATAAAGAGCTGCCAGTTAGATGGATGCTTCATAATGGATACCCGGTACCTCTTGATATGCAACAGAATGCAGAACAATTTGGTATGTTTGAAACTGCAAACCCAGCTAGGGAAAAAGATCCTGATCGCTCTAGCCATGAAGAAAGAAGCTTTGTTGGAGAATTTTGGCATGATGTGAAAAATGTTATGGAACTAAAGAGGGAGAAAATAAGACTCAATTTTTTAAAATCGAAGGATTTATCTGACCGTAAAACTCCTGGCATATTTAAGCAATACAAGTACTTCCTTATACGGGTTGGTAAACAGAGATTACGAGAATCTAAGATCCAAGCTATAGATTATTTAATATTATTACTTGCTGGAGCCTGCTTAGGATCACTTACTAAAGCTAGCGATCAGACCTTTGGTGCATCTGGATACACCTATACGGTGATTGCTGTCTCTCTTTTATGCAAAATATCTGCCCTGAGATCCTTTTCTCTAGACAAATTACATTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCGTATTTCCTCTCCAAAGACACAATCGATCATTTCAATACAGTGATCAAACCTGTCGTTTACCTCTCAATGTTCTATTTCTATACCTATCCAAGATCAACTTTTGCAGATAATTACATTGTGCTGTTTTGTCTTGTATATTGTGTGACTGGCATAGCATATGCATTGGCCATACTTTTTGAACCCGGTGCAGCCCAGCTATGGTCAGTACTTCTTCCAGTTATTTTAACGCTAGTTGCTACACAACCAAAAGATAGTAAATTTTTGAAGGATATAGCTTATTTATGCTATTCTAGGTGGGCTTTAGAAGCGTTCATAATTGCAAATGCTGAAAGGTATCATGGGGTGTGGCTCTTAACTCGTTGTGGCTCACTACTGAAAAGTGGGTATAATCTTCATGATTGGGGTTTGTGCATATCTATCCTCATTCTCATGGGTGTAATTGCTCGGGCAGTAGCATTTTTCTGTATGCTCACCTTTCTAAAGAAATAA 3354 0.4067 MVLNALPVPRCLHLVAVTVVVLVLLRRMQCQQLSDFDNPVIMPRVTSLVYAQISNMTSLLNHEMKARASFCFRDPDGDWNKAFNFSSDLDFVSTCIRKTKGDILQRLCTAAEIKFYLNSLLERSTTRSANYLKPNKNCNLNSWVSGCEPGWACSVSTSQQVDLRNSQEIPARTTNCEACCEGFFCPHGITCMIPCPLGSYCPLATLNSTTGVCEPYLYQLPPMQPNHTCGGANIWADISSSSEIFCSAGSYCSTITNRTPCSRGHYCRMGSTSQQRCFKLNSCDSNSVTQNMHAYGIMLIVALSTLLLIIYSCSDQVLSTREKRMAKSREAASRSVRKIANARQRWKDAKDAAKKGASELQAQLSQTFSRNKDFVDPEEVKILNQPTTETKIELFSHSRPSTSPMISRSSAGPKRKGKEPSDLTQKMNQMENEANIRNNVLFETETREKNVTARVPKEKQLNTNTQIFKYAYAQLEKEKAQQQENMNLTFSGVISMATKSEQRKRPLIEISFKDLSLTLKAHNKLILRCVTGKIKPGRITAVMGPSGAGKTTFLSAIAGKAFGCKVTGSIFVNGKNESIHSYKKIIGFVPQDDIVHGNLTVEENFRFSALCRLPADLPKPEKVLIVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLAKGGLTVYHGSVKKVEEYFADLGINIPKRINPPDQFIDILEGIAVPSGSSEVSYKELPVRWMLHNGYPVPLDMQQNAEQFGMFETANPAREKDPDRSSHEERSFVGEFWHDVKNVMELKREKIRLNFLKSKDLSDRKTPGIFKQYKYFLIRVGKQRLRESKIQAIDYLILLLAGACLGSLTKASDQTFGASGYTYTVIAVSLLCKISALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPVVYLSMFYFYTYPRSTFADNYIVLFCLVYCVTGIAYALAILFEPGAAQLWSVLLPVILTLVATQPKDSKFLKDIAYLCYSRWALEAFIIANAERYHGVWLLTRCGSLLKSGYNLHDWGLCISILILMGVIARAVAFFCMLTFLKK* 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00325 1117 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 424 1104 - -
Lapu7g00325 1117 Pfam ABC-2 type transporter 708 1117 IPR043926 GO:0140359
Lapu7g00325 1117 FunFam ABC transporter G family member 24 504 746 - -
Lapu7g00325 1117 Pfam ABC transporter 529 679 IPR003439 GO:0005524
Lapu7g00325 1117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 510 743 IPR027417 -
Lapu7g00325 1117 SMART AAA_5 536 728 IPR003593 GO:0016887
Lapu7g00325 1117 Gene3D - 496 751 IPR027417 -
Lapu7g00325 1117 MobiDBLite consensus disorder prediction 394 409 - -
Lapu7g00325 1117 ProSitePatterns ABC transporters family signature. 651 665 IPR017871 GO:0005524|GO:0016887
Lapu7g00325 1117 MobiDBLite consensus disorder prediction 394 424 - -
Lapu7g00325 1117 CDD ABCG_EPDR 508 734 - -
Lapu7g00325 1117 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 510 751 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00325 Lapu-Chr7 3989716 4015107 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00325 507 740 Calmodulin-binding Proteins AT2G36910 27.273 4.59e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00325 - - gmx:100783798 1923.29