Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00315 ATGAAGAACTCTGGTTGGGAAAGTGGCATGCTCATTGAGAGTGATGAAGATGTGGAGAAGGATCTGCATAAAGATGCGAATGATGGAAACGATTCAGATTATTCGAATGATTCCAATGAAAACCAGTCAATGAGGAAACCCAGCAGCTACAGCATCGCATGGCCTCAAAGTTACAGGCAATCCATTGATCTATATGGTAGTGTACCATCACCAAATATTGGATTTCTGGGGACCACATCACTGTCAAGATTAGGAAGTTCTTTCATTTCCTCATCTTTGACAAGGAGGCAAACTCTAGAAATATTACAACCAGAGAAAAAACCACTCTTGCGACCCACAGAAGAGGAGCAACCGAAACATACCTTGCTTCCTTCGCAACTTTCTAGGAAGTCTTCCATTAAGAAAGATGCTTCCAAGGTTTCTCATGAAGTTCACATACCTGGCCAATGCACTTTTGGACAAGCTGTGCTTAATGGCATAAATGCCCTTTGTGGAATAGGAATCCTTTCAACCCCTTATGCAGCTAAAGAAGGTGGATGGGTTGGTCTTTCTATATTGTTATTGTATGCACTTTTTTCCTATTATACTGGTTTGCTCCTTCGTTACTGCTTGGACAGTGCACCTGGTCTTGAGACATACCCTGACATTGGTCAAGCAGCTTTTGGTACTAGTGGACGTATCATCATTTCTATAATATTGTACATGGAACTATATGCTTGTTGCATTGAGTACATAATTGTGGAAAGTGACAACTTATCTACATTGTTTCCAAATGCACACATTAGTTTGGGTGGAATCGAATTGAATGCACACATTCTGTTTGCAATATTGACAGCAGTGGCTCTTCTTCCTACTGTTTGGCTTCGTGATCTACGTATTCTCAGTTACATCTCAGCTTGTGGAGTTATTGCAACGGTTCTAGTGGTTATATGCTTGTTCTGGGTTTGCTTGGTAGACAAAGCAGCGATTGATCATGCCCAAGGAGCACCAACCACATCAACATTCAATCTTGCAACTTTTCCTGTTGCAATGGGTCTCTATGGCTACTGCTACGCAGGACATGCTGTGTTTCCAAACCTCTACACTGCCATGGCAAATCGAAATCAATTTCCTGGGGTGCTCTTAGTATGTTTTGCTATTTGTACAACTCTGTATTGTGCAGTAGCTGTTATGGGTTACTCAGCATTTGGAGAAGCAACACTGTCTCAGTTCACTCTTAACATGCCCCAACACTTAGTAGCTGCCAAGATAGCTGTGTGGACTACGGTGGTGAATCCATTTACAAACACCACATATGCATTGAGTCTATCTCCAGTAGCAATGTGTCTGGAGGAGTTGATACCACCAACCAATCCCAACTTCAACATATATTCCAAGCTCATTAGAACAGCTCTAGTAGTTTCTACACTGATTGTTGGTCTTTCAGTTCCCTTTTTTGGTTTGGTGATGTCATTGACTGGATCTTTACTCACTATGTTTGTTTCATTGATTCTTCCCGCTGCTTGTTTTCTAAGCATAAGGGGTGGCAGAATCTCCCGCTTTCAGGTATCACTTTGTGTTACAATTATATTAGTAGGTGTTGTATCAAGCTGTTTTGGATCATACTCATCCCTCTCTGAGATCATTGAGGAATTGTTTGGATAA 1644 0.4142 MKNSGWESGMLIESDEDVEKDLHKDANDGNDSDYSNDSNENQSMRKPSSYSIAWPQSYRQSIDLYGSVPSPNIGFLGTTSLSRLGSSFISSSLTRRQTLEILQPEKKPLLRPTEEEQPKHTLLPSQLSRKSSIKKDASKVSHEVHIPGQCTFGQAVLNGINALCGIGILSTPYAAKEGGWVGLSILLLYALFSYYTGLLLRYCLDSAPGLETYPDIGQAAFGTSGRIIISIILYMELYACCIEYIIVESDNLSTLFPNAHISLGGIELNAHILFAILTAVALLPTVWLRDLRILSYISACGVIATVLVVICLFWVCLVDKAAIDHAQGAPTTSTFNLATFPVAMGLYGYCYAGHAVFPNLYTAMANRNQFPGVLLVCFAICTTLYCAVAVMGYSAFGEATLSQFTLNMPQHLVAAKIAVWTTVVNPFTNTTYALSLSPVAMCLEELIPPTNPNFNIYSKLIRTALVVSTLIVGLSVPFFGLVMSLTGSLLTMFVSLILPAACFLSIRGGRISRFQVSLCVTIILVGVVSSCFGSYSSLSEIIEELFG* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00315 547 MobiDBLite consensus disorder prediction 1 48 - -
Lapu7g00315 547 FunFam Amino acid transporter AVT1A 148 544 - -
Lapu7g00315 547 Pfam Transmembrane amino acid transporter protein 150 535 IPR013057 -
Lapu7g00315 547 MobiDBLite consensus disorder prediction 103 132 - -
Lapu7g00315 547 MobiDBLite consensus disorder prediction 32 48 - -
Lapu7g00315 547 PANTHER OS05G0424000 PROTEIN-RELATED 158 525 - -
Lapu7g00315 547 MobiDBLite consensus disorder prediction 13 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00315 Lapu-Chr7 3837226 3847444 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00315 7 480 Amino Acid or Auxin Permease AAAP Family AT2G39130 63.093 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00315 K15015 - gmx:100798108 917.531