Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00313 ATGATATCTCAGTCATGTGTTGTGATTGCAGTATCACTGTTATTTGCTATAGCACAAAGTGTTGTGGGAGTGAATTCACTTTCACAAGCTGATAAGATAAGCACTTTGCCAGGGCAGCCACCAGTCACATTCCAGCAATATGCTGGTTACATTACAGTGGATGAGAAGCAGAAGAGAGCTTTGTTTTACTACTTTGTTGAAGCAGAAGGGGAACCAACTTCAAAGCCTCTTGTTTTATGGTTAAATGGAGGGCCTGGTTGTTCTTCTGTTGGAGCTGGAGCTTTTGTTGAGCATGGCCCTTTCAAACCAAGTGAAAATGGTCTTCTGAAAAATGAATTTAGTTGGAACAAAGAGGCAAATATGCTGTACTTGGAATCACCAGCCGGTGTTGGTTTCTCCTACTCTGCCAACAAATCTTTCTATGACCATGTCAATGATGAAATAACAGCAAGAGACAATCTTGTTTTCCTACAGCGTTGGTTCACTAAATTCCCAGAGTTCAAAAACAATGATTTCTTTATCACAGGGGAAAGCTATGCAGGTCACTATGTACCCCAACTTGCACAACTCGTTGTTAAAACCAAGACCAAGTTCAATCTCAAGGGAATAGCAATAGGGAATCCTCTTCTAGAATTTAACACGGATTTCAACTCTAGAGCTGAGTTTTTCTGGTCCCATGGCCTAATATCAGATTCAACTTACGAAATCTTCACTAAAGTATGCAACTATTCTCAAATTAGGAGACAACATCAAAGTGGGACACTTACCCCCATTTGTTCAGGAGTAAACAAATTAGTGTCATCGGAAGTTAGTAGATATATTGATACATATGATGTTACACTTGATGTTTGTCTTTCATCTGAAGATCAACAGGCTTATTTTCTGAATCAACTGACTCAACTGCAAGAGGGTGGAAAGATAGATGTTTGTGTGGAAGATGAGACTATTGCATATTTGAATAGGAAAGACGTGGTGGAAGCTCTCCATGCTAAGCTCGTAGGGGTCTCCTCGTGGTCAACTTGCACCGATACTATTAAATATGACTTGCAGAATCTAGAGATTCCAACTATTTCAATTTTAGGTGCACTTGCTAAGTCTGGTATCAGGGTTCTGGTATACAGTGGAGATCAAGATTCAGTCATCCCATTAATTGGTACAAGATCACTGGTAAATGGATTGGCCAAGGACTTTGGACTTAACGCAACAGTGTCCTATAGAACCTGGTTTGAGGGAAGACAGGTGGCTGGTTGGACACAAGTATATGGAGACATCTTATCATTTGCCACTGTAAGAGGAGCAGCTCATGAAGTTCCATTTTCCCAGCCAGAGAGGTCTCTGGTGCTACTAAAAGCATTTTTGGAAGGAAAGCCACTTCCAGAACAATTCTTTCAAATATGA 1398 0.4056 MISQSCVVIAVSLLFAIAQSVVGVNSLSQADKISTLPGQPPVTFQQYAGYITVDEKQKRALFYYFVEAEGEPTSKPLVLWLNGGPGCSSVGAGAFVEHGPFKPSENGLLKNEFSWNKEANMLYLESPAGVGFSYSANKSFYDHVNDEITARDNLVFLQRWFTKFPEFKNNDFFITGESYAGHYVPQLAQLVVKTKTKFNLKGIAIGNPLLEFNTDFNSRAEFFWSHGLISDSTYEIFTKVCNYSQIRRQHQSGTLTPICSGVNKLVSSEVSRYIDTYDVTLDVCLSSEDQQAYFLNQLTQLQEGGKIDVCVEDETIAYLNRKDVVEALHAKLVGVSSWSTCTDTIKYDLQNLEIPTISILGALAKSGIRVLVYSGDQDSVIPLIGTRSLVNGLAKDFGLNATVSYRTWFEGRQVAGWTQVYGDILSFATVRGAAHEVPFSQPERSLVLLKAFLEGKPLPEQFFQI* 466
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00313 465 FunFam Carboxypeptidase 26 459 - -
Lapu7g00313 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Lapu7g00313 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Lapu7g00313 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 425 438 IPR001563 GO:0004185|GO:0006508
Lapu7g00313 465 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Lapu7g00313 465 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Lapu7g00313 465 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 32 442 IPR001563 GO:0004185|GO:0006508
Lapu7g00313 465 Gene3D alpha/beta hydrolase 26 459 IPR029058 -
Lapu7g00313 465 FunFam Carboxypeptidase 356 455 - -
Lapu7g00313 465 Pfam Serine carboxypeptidase 37 455 IPR001563 GO:0004185|GO:0006508
Lapu7g00313 465 SUPERFAMILY alpha/beta-Hydrolases 35 459 IPR029058 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu7g00313 Lapu-Chr7 3820493 3824365 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00313 318 458 Calmodulin-binding Proteins AT2G22960 27.660 7.07e-16 73.9