Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00310 ATGGAGAGTCTCATGAATCTCAGCGATTTCGAATTGAGTCACAAGGATCGCTCCATCGAAGCCCTTGGAAAATGGAGATCTGCAGTGTGGCTCGTCAAAAACCCTCGCAGACGCTTCCGTTGGGTTGCCGATCTCGTCAAACGCAAACACGCAGAGGAAAAGTGCCGCAAATTACAGGGAAAGATTCGGGCCATTATCTATGCCGAAAGGGCAGCAATGCAATTTATGGAAGCTATTGCTCCAGCTGAATACAAGGTGTCAGAAAAGACGAGAGAAGCTGGTTTTGGCATTGAACCAGATGATATTGCGTCACTGGTTCGAGGTCATGATTACAAGACCTATAAAAAAATTGGTCAAGTTGAAGCGATTATACAGAAACTTGGTGCCTCAGTGGATGATGGTGTTGGTAGAGACAGTATAGATACCAGGCAAGAGATTTATGGAGTCAACCGTTATACTGAGAAACCTTCTAAAAGCTTCCTCATGTTTGTTTGGGAAGCACTGCACGACTTAACACTGATCATTCTCATGGTCTGTGCGATAGTTTCTATAGCCATTGGGCTTCCCACTGAAGGATGGCCAAAAGGTGTTTATGATGGTCTGGGAGTCATACTTAGTATATTCTTGGTAGTCATTGTTACTGCTATCAGTGACTATCAGCAATCCTTGCAGTTCAGGGACTTGGACAAGGAAAAGAAAAAGATCTTTGTTCAGGTCACAAGGGACAAAAAAAGACAGAAGGTCTCAATTTATGATTTGGTTGTGGGAGATATTGTTCATTTGTCAACTGGTGATCAAGTTCCTGCTGATGGCATTTATATATCAGGATATTCTTTGGTAATTGATGAGTCAAGTTTGACAGGTGAGAGTGAACCAGTAAATATAGATGAAAAAAGACCTTTTCTTCTTTCAGGAACCAAAGTTCAAGATGGTCAGGGGAAGATGATAGTTACGACTGTCGGTATGAGGACTGAATGGGGAAAGTTGATGGAAACTCTAAGTGAGGGAGGAGAGGATGAGACTCCACTACAGGTGAAACTAAATGGAGTTGCTACAGTTATTGGTAAAATTGGTTTGACTTTTTCTGTGCTAACATTTCTGGTCTTGACAATAAGGTTTGTGGTCGAAAAAGCTGTTAGTGGTGATTTTGCTAGTTGGTCTTCAAATGATGCATTGAAGCTGCTGGACTACTTTGCTATTGCGGTAACTATAATAGTTGTTGCAATTCCTGAAGGATTGCCGTTAGCTGTGACACTCAGTCTTGCTTTTGCAATGAAAAAGTTGATGAAGGATAAGGCACTTGTGAGACATCTCTCTGCCTGTGAAACTATGGGTTCGGCGACTTGCATCTGCACAGATAAAACAGGAACATTGACCACTAACCATATGGTGGTTAATAAAATTTGGATATGTGGTAAGAGTCTGGAGATTAAAGGTAACGAGAGTATTGACAAACTGAAGACAGAGATACCTGAAGAAGTTTTAAGCATCCTGTTGCGAGCTATATTTCAAAATACTTCTTCTGAAGTAGTTAAGGACAAAAATGGAAATACAACAACATTGGGAACACCAACAGAATCAGCATTATTGGAATTTGGCTTGCTTTCAGGTGGCGATTTTGATGCGCAGCGTGCAACATATAAGATACTTAAGGTTGAGCCTTTCAATTCAGTCCGGAAGAAGATGTCCGTGCTAGTAGGTCTTCCTGATGGAGGTGTTCAAGCTTTCTGCAAAGGTGCTTCAGAAATAGTGTTAAAATTGTGTAACAAAGTTATTGATCCTAATGGAACAGTTGTTGATCTTTCTGATGAGCAGGCAAAGAATGTCTCTGACATTATAAATGGCTTTGCCTGTGAAGCTTTGAGAACTCTATGTTTAGCTGTCAAAGATGTAAATGAATCCCTAGGGGAAACCAGCATCCCTGAAGATGGCTATACTCTGATAGCCATTGTGGGAATCAAGGATCCTGTACGCCCTGGGGTTAAGGAAGCTGTTCAAACTTGCTTAGCTGCTGGAATAACTGTCCGCATGGTTACCGGTGATAACATAAATACAGCGAAAGCTATAGCTAAAGAATGTGGCATACTTACGGAGGATGGTGTAGCTATAGAAGGACCCCAATTTCGTGACTTGTCTCCAGAGCAAATGCAGAGTATTATACCAAGAATTCAGGTTATGGCGCGATCCTTACCTCTTGACAAGCACACCTTAGTAACCCGTTTGAGGAATATGTTTGGTGAGGTTGTAGCTGTTACTGGTGATGGAACCAATGATGCTCCTGCACTGCATGAGTCAGACATTGGACTTGCTATGGGCATAGCTGGAACTGAGGTTGCCAAAGAAAATGCTGATGTCATTATAATGGATGATAACTTCAGTACTATTGTCAATGTGGCCAGATGGGGACGGGCCATATACATCAACATTCAAAAATTTGTGCAGTTTCAGTTAACAGTCAATATTGTTGCTCTGATTATTAACTTTGTTTCTGCATGTATCACAGGATCTGCTCCCCTCACAGCTGTTCAGTTGCTTTGGGTTAACTTGATTATGGACACTCTGGGTGCGTTGGCCTTGGCCACTGAACCTCCCAATGATGGACTTATGCTAAGACCCCCTGTTGGAAGGACAACAAATTTTATTACCAAATCCATGTGGAGGAATATTTTTGGTCAAAGTATATATCAACTAATTGTCCTTGCGGTTCTCACTTTTGACGGGAAAAGACTACTGAGAATGAATGCTTCAGATTCAACTATAGTGCTCAACACTTTGATATTCAACTCATTTGTATTTTGCCAGGTTTTCAATGAGATAAACAGCCGAGATATTGAAAGGATAAACATATTCAAGGGCATGTTTGAGAGCTGGATATTTTTTACGGTTATTTTCTCCACAGTGGTATTTCAAGTAGTGATAGTTGAGTTCCTGGGAACATTTGCCAGCACAGTGCCTCTAAGCTGGCAATTCTGGGTACTCAGCGTGGTAATTGGAGCAATTAGCATGCCTATAGCTGCTATACTTAAGTGCATCCCAGTTGACAAAGGAGACGCTACAAAGCACCATGATGGTTATGAGGCACTGCCTTCTGGTCCCGAGCTGGCGTAA 3108 0.4176 MESLMNLSDFELSHKDRSIEALGKWRSAVWLVKNPRRRFRWVADLVKRKHAEEKCRKLQGKIRAIIYAERAAMQFMEAIAPAEYKVSEKTREAGFGIEPDDIASLVRGHDYKTYKKIGQVEAIIQKLGASVDDGVGRDSIDTRQEIYGVNRYTEKPSKSFLMFVWEALHDLTLIILMVCAIVSIAIGLPTEGWPKGVYDGLGVILSIFLVVIVTAISDYQQSLQFRDLDKEKKKIFVQVTRDKKRQKVSIYDLVVGDIVHLSTGDQVPADGIYISGYSLVIDESSLTGESEPVNIDEKRPFLLSGTKVQDGQGKMIVTTVGMRTEWGKLMETLSEGGEDETPLQVKLNGVATVIGKIGLTFSVLTFLVLTIRFVVEKAVSGDFASWSSNDALKLLDYFAIAVTIIVVAIPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSATCICTDKTGTLTTNHMVVNKIWICGKSLEIKGNESIDKLKTEIPEEVLSILLRAIFQNTSSEVVKDKNGNTTTLGTPTESALLEFGLLSGGDFDAQRATYKILKVEPFNSVRKKMSVLVGLPDGGVQAFCKGASEIVLKLCNKVIDPNGTVVDLSDEQAKNVSDIINGFACEALRTLCLAVKDVNESLGETSIPEDGYTLIAIVGIKDPVRPGVKEAVQTCLAAGITVRMVTGDNINTAKAIAKECGILTEDGVAIEGPQFRDLSPEQMQSIIPRIQVMARSLPLDKHTLVTRLRNMFGEVVAVTGDGTNDAPALHESDIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVARWGRAIYINIQKFVQFQLTVNIVALIINFVSACITGSAPLTAVQLLWVNLIMDTLGALALATEPPNDGLMLRPPVGRTTNFITKSMWRNIFGQSIYQLIVLAVLTFDGKRLLRMNASDSTIVLNTLIFNSFVFCQVFNEINSRDIERINIFKGMFESWIFFTVIFSTVVFQVVIVEFLGTFASTVPLSWQFWVLSVVIGAISMPIAAILKCIPVDKGDATKHHDGYEALPSGPELA* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00310 1035 FunFam Calcium-transporting ATPase 769 1015 - -
Lapu7g00310 1035 Gene3D - 448 797 IPR023214 -
Lapu7g00310 1035 Gene3D - 166 1011 - -
Lapu7g00310 1035 FunFam Calcium-transporting ATPase 17 77 - -
Lapu7g00310 1035 SFLD Haloacid Dehalogenase 433 805 - -
Lapu7g00310 1035 SUPERFAMILY Calcium ATPase, transduction domain A 236 332 IPR008250 -
Lapu7g00310 1035 Gene3D - 461 656 IPR023299 GO:0000166
Lapu7g00310 1035 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Lapu7g00310 1035 SMART Cation_ATPase_N_a_2 116 188 IPR004014 -
Lapu7g00310 1035 NCBIfam HAD-IC family P-type ATPase 717 840 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu7g00310 1035 NCBIfam HAD-IC family P-type ATPase 204 474 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu7g00310 1035 NCBIfam HAD-IC family P-type ATPase 546 697 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu7g00310 1035 PANTHER CATION TRANSPORTING ATPASE 88 1013 - -
Lapu7g00310 1035 SUPERFAMILY HAD-like 450 857 IPR036412 -
Lapu7g00310 1035 Pfam Cation transport ATPase (P-type) 507 591 - -
Lapu7g00310 1035 Gene3D - 134 334 - -
Lapu7g00310 1035 FunFam Calcium-transporting ATPase 213 334 - -
Lapu7g00310 1035 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 457 661 IPR023299 GO:0000166
Lapu7g00310 1035 SUPERFAMILY Calcium ATPase, transmembrane domain M 118 1013 IPR023298 -
Lapu7g00310 1035 Pfam Cation transporting ATPase, C-terminus 837 1010 IPR006068 -
Lapu7g00310 1035 FunFam Calcium-transporting ATPase 649 797 - -
Lapu7g00310 1035 CDD P-type_ATPase_Ca_PMCA-like 140 885 - -
Lapu7g00310 1035 FunFam Calcium-transporting ATPase 461 656 - -
Lapu7g00310 1035 SFLD p-type atpase 433 805 IPR044492 -
Lapu7g00310 1035 Gene3D - 17 78 - -
Lapu7g00310 1035 Pfam E1-E2 ATPase 236 430 - -
Lapu7g00310 1035 NCBIfam calcium-translocating P-type ATPase, PMCA-type 111 1013 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lapu7g00310 1035 Pfam Ca2+-ATPase N terminal autoinhibitory domain 8 49 IPR024750 GO:0005516
Lapu7g00310 1035 PRINTS P-type cation-transporting ATPase superfamily signature 451 465 - -
Lapu7g00310 1035 PRINTS P-type cation-transporting ATPase superfamily signature 752 771 - -
Lapu7g00310 1035 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Lapu7g00310 1035 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Lapu7g00310 1035 PRINTS P-type cation-transporting ATPase superfamily signature 282 296 - -
Lapu7g00310 1035 PRINTS P-type cation-transporting ATPase superfamily signature 776 788 - -
Lapu7g00310 1035 Pfam Cation transporter/ATPase, N-terminus 119 183 IPR004014 -
Lapu7g00310 1035 PRINTS H+-transporting ATPase (proton pump) signature 752 768 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu7g00310 1035 PRINTS H+-transporting ATPase (proton pump) signature 784 809 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lapu7g00310 1035 PRINTS H+-transporting ATPase (proton pump) signature 609 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00310 Lapu-Chr7 3788167 3798025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00310 61 1032 Primary Pumps ATPases AT3G57330 72.119 0.0 1459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00310 K01537 - gmx:100785768 1825.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00310 7 3788167 3798025 Lapu7g00310 7 3788167 3798025 ECH
Lapu1g00196 1 8271489 8285193 Lapu7g00310 7 3788167 3798025 PCT