Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00300 ATGGAGGAAGAAAGTGAGAAAGGGTTGCTGGAATGTGTGAGGAAATTGTCAACACCACCCTTCTTGTTGAAGACATACATGTTGGTTGAGGATCCTGCCACCAATGATGTCGTGTCGTGGAATGACGATGGAACAACGTTTGTGGTGTTGCAACCTGCAGAGTTTGCTCGTGATCTTCTCCCAACTCTCTTCAACCATTGCAACTTCTCAAGCTTTGTTCGTCAGCTCAATACTTATGGATTTCGTAAAGTTACAACAAGCAGATGGGAGTTTTGCAACGACCAATTCAGAAAGGGTGAGAAAGAGCTGCTATGCGAGATTAGACGTAAGAAATCATGGGTGAACAAGAGACAACACACCATTGCACCAATCCAAACCACACCTCAAGACTCAGATGAAGATCAAAGGTCCTTAGTATCAGCCTTTTCTTCAAATCATGCAATTCTCATGGATGAAAACAAGCGACTCAAGAAGGAGAATGAGGTGTTGCACTCAGATCTCACAACCATGAAGAGGAAGTGCAGGGAATTGCTTGATTTGGTGGCCAAATATTCATGTGCAAAGGAAGAAGGGGTGCATGAGAAACCAATGTTGTTTCGGGTGAGATTGGAAGAAGTCCAAGGAGAAAGGGAGATTAAAAAGAAGAAGAAAATAGCAGAAATAAGTGAAAGCACAAGCATTTTTCTATCTCATGATTCTAGATTTGTGATGTATGGTTAA 720 0.4208 MEEESEKGLLECVRKLSTPPFLLKTYMLVEDPATNDVVSWNDDGTTFVVLQPAEFARDLLPTLFNHCNFSSFVRQLNTYGFRKVTTSRWEFCNDQFRKGEKELLCEIRRKKSWVNKRQHTIAPIQTTPQDSDEDQRSLVSAFSSNHAILMDENKRLKKENEVLHSDLTTMKRKCRELLDLVAKYSCAKEEGVHEKPMLFRVRLEEVQGEREIKKKKKIAEISESTSIFLSHDSRFVMYG* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00300 239 Coils Coil 153 173 - -
Lapu7g00300 239 FunFam Heat stress transcription factor B-4 13 111 - -
Lapu7g00300 239 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 17 181 IPR027725 -
Lapu7g00300 239 SMART hsfneu3 17 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g00300 239 SUPERFAMILY "Winged helix" DNA-binding domain 17 110 IPR036390 -
Lapu7g00300 239 Gene3D - 13 111 IPR036388 -
Lapu7g00300 239 PRINTS Heat shock factor (HSF) domain signature 72 84 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g00300 239 PRINTS Heat shock factor (HSF) domain signature 59 71 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g00300 239 PRINTS Heat shock factor (HSF) domain signature 21 44 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lapu7g00300 239 Pfam HSF-type DNA-binding 21 110 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00300 Lapu-Chr7 3632533 3635992 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00300 19 184 HSF AT2G41690 56.983 4.73e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lapu7g00300 HSF_DNA-bind 2e-30 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00300 K09419 - qsu:112013936 310.071