Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00293 ATGAAGAATCATGAACCCTTTCAAACCCTCTTTTTCCTCTCCACTCTTGTGCTGCTTTTTATCTCCTCTGCAAAGGGAAAGTGTCCACCATCCTTTGTTTGTGGGAACCTCGGCACCATTGATTTCCCTTACACTGACACGAAACACCCTCATTGTGGCCTGTTGGTGATACATGGCTGCGATGACCGTGACCCAGATGCGATTAAAACAATTAAGAACAAAGGACAATGGTTTTACATCACACGTGATCCAAACACAAACACCCTTCTGTTCAAAGATGATGAACTTCGCACCTACTTGCTGAAACAAAGCTGTGTGGTGTTCAGCCAAAACTACACCAGTTTGGACACCACTTCTCCTTTCCTTTCACTTCTCTTCACCAATGTTACTCTGTTCACATGCAACCGAACCCTCAATGTAACCCCTCCTTCTTCAGCATTTTATAAATCTACTAAATGCCAGAATGAGGACATCTTCTATGGCACGGCTAATGTTGAGGAGTCCCTCAGTTACGGGTCCGAAGAGTTTCATTCTTATTTTGCACCGTGTTCAATGGTTAGACTTCCAATAAGAGATGCAGGGCTTGTACCTAACTCAAATGGAAGCCTCTTTGACTATGTATCAGCTGATATTCCTGTCGAAACGGAAGTGTCTAATGATTGTCTTTCTTGTTACCGTCTTAGAGGAGGCCAGTGTCAACTTGACAGCAAAGGGAAGTTCTTTTGTATGCAAGCTACATCAGCTGCTGGAGCACTGGGAATTTTGATGATCTTGGCTTGTATCTTACGAAGATACTATTGCCAGAAAAAGAATCCCACTTACGTAATGATTGAGAACTTTCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGTTACTTGGAGATAAAGAAAATGACCAACTCCTTCAAAAACAAATTAGGCCAAGGAGGGTTTGGTAGTGTATACAAAGGGAGGTTACAAAATGGAAGTCTCGTGGCAGTGAAGGTTTTAAGTAAGTTAAAAGGTGATGGAGAAGAGTTCATCAATGAAGTTGCTAGTATTAGCATGACTTCTCATGTTAACATTGTCAGTCTACTGGGGTTTTGCTTGGAAGGATCCAAAAGATTTCTCATATACGAGTACATGCCCAATGGATCCCTTGAAAAGTTCATATATGAAGAGAAAGATCCTTTAAGGCTGAAACTCACATTAAATTGCAGAACAATGTACAATATTGCCATTGGTGTTGCTCGAGGACTGGAGTATTTGCACAAGGGTTGTAACACCAAAATCTTGCATTTTGACATAAAACCTCACAATATACTTCTAGATGAGTTGTTTTGCCCCAAAATATCAGATTTTGGACTTGCTAAAATATGTCCTAGAGAAAAAAGTATTGTATCAATGATGGTTGCTAGGGGAACCATAGGATATATTGCTCCTGAATTGTTCTGCAGAAATTTTGGTGGAGTGTCACATAAATCAGATGTCTACAGTTATGGAATGATGGTATTGGAAATGCTAGGTGCTAGAGAGAATAATAATGGCAGAGTTGATTTTTCAAGTGAAAATTACTTTCCACATTGGATTTACAACCATCTTGAATCAAATCAAGACCTTCAATTTCGATGCACCAAAAATCAAAATGATGAAGAAATGGTGAGAAAAATGACTATTGTATGTTTGTGGTGCATACAAACAGACCCTTCAAAACGACCTGCTATGAGTAAAGTAGTGGAAATGATGGAAGGAAGCATTAGCTCACTGCAAATTCCACCCAAATCTCTGCTTTTTTTATCCTCGGTTCCCCAATCCGAATCAAGTGATACTTCATAG 1821 0.3992 MKNHEPFQTLFFLSTLVLLFISSAKGKCPPSFVCGNLGTIDFPYTDTKHPHCGLLVIHGCDDRDPDAIKTIKNKGQWFYITRDPNTNTLLFKDDELRTYLLKQSCVVFSQNYTSLDTTSPFLSLLFTNVTLFTCNRTLNVTPPSSAFYKSTKCQNEDIFYGTANVEESLSYGSEEFHSYFAPCSMVRLPIRDAGLVPNSNGSLFDYVSADIPVETEVSNDCLSCYRLRGGQCQLDSKGKFFCMQATSAAGALGILMILACILRRYYCQKKNPTYVMIENFLKQHGHLSAKRYSYLEIKKMTNSFKNKLGQGGFGSVYKGRLQNGSLVAVKVLSKLKGDGEEFINEVASISMTSHVNIVSLLGFCLEGSKRFLIYEYMPNGSLEKFIYEEKDPLRLKLTLNCRTMYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDELFCPKISDFGLAKICPREKSIVSMMVARGTIGYIAPELFCRNFGGVSHKSDVYSYGMMVLEMLGARENNNGRVDFSSENYFPHWIYNHLESNQDLQFRCTKNQNDEEMVRKMTIVCLWCIQTDPSKRPAMSKVVEMMEGSISSLQIPPKSLLFLSSVPQSESSDTS* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00293 606 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Lapu7g00293 606 SUPERFAMILY Protein kinase-like (PK-like) 285 577 IPR011009 -
Lapu7g00293 606 FunFam PR5-like receptor kinase 377 589 - -
Lapu7g00293 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 597 IPR045874 GO:0004672
Lapu7g00293 606 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00293 606 SMART serkin_6 302 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00293 606 FunFam serine/threonine-protein kinase PBS1-like 275 376 - -
Lapu7g00293 606 Pfam Protein kinase domain 305 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00293 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Lapu7g00293 606 Gene3D Phosphorylase Kinase; domain 1 277 376 - -
Lapu7g00293 606 Gene3D Transferase(Phosphotransferase) domain 1 377 586 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00293 Lapu-Chr7 3532073 3534822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00293 10 606 Receptor kinase-like Gene Family AT5G38260 37.660 1.06e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lapu7g00293 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00293 - - gmx:100807312 992.26