Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00284 ATGGCTGCACTTACTACTGTCCACGCCTCCCTCTTCCCCACCAACACCACTCTTCCAAAGCCATCATCTTTTCAACCCTTCTTCTCTACCCAACTTCTTGGCCTACCCTTATCTTCTTTTTCCTCCTCCAAAAGATTATCTTCCTTCTCTTGCAGGCCCATCAAATGTTCTGTTTCCGAAGCCACAGAACCCAAAACTGGTGAGAAGAAGAGGCAATTGTTGAGAAGAGGAGACGTGAGAAACATAGCAATTGTTGCTCATGTTGATCATGGAAAGACTACTCTCGTTGATGCCATGCTCAAACAAACTAAGGTATTTCGTGATAATCAATTTGTGCAGGAAAGGATAATGGACTCGAATGACTTGGAGCGCGAAAGAGGGATCACAATACTGAGTAAAAATACATCTGTCACCTATAAAGACACAAAGATCAATATAATAGATACTCCAGGTCACTCTGATTTTGGGGGTGAAGTGGAGCGTATCTTAAATATGGTGGAAGGGATCCTTTTAGTGGTAGATTCTGTTGAAGGACCAATGCCACAGACAAGATTTGTCTTGAAGAAGGCTTTAGAGTTTGGTCATTCAGTTGTTGTGGTTGTGAATAAAATAGACAGGCCTTCTGCTCGCCCAGATTTTGTCGTCAATTCTACTTTTGAACTCTTCATTGAACTAAATGCCACAGACGAACAGTGTGACTTTCAAGTAATATATGCGAGTGGTATAAAAGGGAAAGCAGGTTTGTCTCCTGAAAATCTGGCAGAAGACCTTGGTCCATTGTTTGAATCCATCATTAGATGCATCCCTGGACCACGCATTGACAAAGATGGTGCTCTTCAAATGCTGGTGACAAATATTGAGTATGATGAACATAAAGGGCGTATAGCAATTGGGCGTGTGCAAGCTGGAGTTTTAGAAAAAGGCATGGATGTTCGAGTATGTACTTCAGAAGATTCATGTAGATTTGGAAGAATTAGTGAGCTCTACGTGTATGACAAATTCAGTAGGGTTCCTGCAGATAATGTGGAGGCAGGTGATATATGTGCAGTGTGTGGAATTACTGATATTCAGATTGGGGAGACAATTGCTGATAAAGTATCTGGGAAGCCACTACCTTCCATCAAGGTGGAAGAACCAACAGTCAAAATGTCTTTCTCCATAAATACTTCACCTTTTGTTGGCCGTGAGGGAAAGTATGTTACTAGTAGGAATTTAAGGGATAGGCTTTATCGTGAACTTGAGCGGAATCTGGCTATGAAAGTTGAAGATGGTGAAACAGCTGATACATTTGTTGTCAGTGGGCGTGGAACTTTGCATATCACTATACTAATAGAAAATATGCGAAGAGAAGGTTATGAATTCATGGTTGGTCCTCCCAAAGTTATCAACAAGAAGCTGAATGAACAACTGTTGGAACCGTATGAGATTGCAACCGTGGAGGTGCCGGAAGAGCACATGGGAGCTGTTGTTGAACTTCTTGGCAAGAGACGAGGACAGATGTTTGACATGCAAGGAATGAGATCGGAAGGAACTACACTACTCAAATATAAGATCCCAACACGTGGCCTTCTTGGATTGCGGAATTCAATTTTAACTGCCTCCCGAGGGACGGCTATTCTCAACACCATCTTTGATAGCTATGGGCCTTGGGCTGGTGAAATTAGTACCCGTGATCAAGGCTCATTGGTTGCTTTTGAGGATGGAGCAAGTACTTCTTATGCAATCTCTAGTTCACAGGAGAGGGGACAGATGTTTATTGGTCCTGGTGTGGAAGTTTATAAAGGTCAAATTGTTGGCATCCATCAGCGACCTGGGGACCTGTCCTTGAATGTTTGTAAGAAGAAAGCTGCTACCAACATACGTTCCAACAAGGAACAAACAGTGATTCTTGATACACCATTGGACTATAGTCTGGATGACTGCATTGAATACATCCAAGAAGATGAACTAGTGGAGGTCACCCCCGCAAGTATCCGAATGTGCAAGAATCCAAAATTAGCAAAGAAAACAAGGGAGACGAAGGAGGAGTGGGCGTGCAAATCGATATCCAAGAAGAAATTGCGAACGGCGATCGATATCGAGGATGTGCGGAGGGAGGTGGAGATCATGCGCCACTTGCCCAAACACCCCAACATCGTCACGCTAAAGGACACCTTCGAAGACAACAATGCCGTTCACCTCGTCATGGAGCTCTGCGAGGGTGGCGAGCTCTTCGATCGCATTGTCGCACGCGGCCACTACACCGAGCGCGCCGCTGCCACCGTCGCCAAAACCATCGTCGAAGTCGTCCAGATGTGCCACAAACATGGTGTGATGCATAGAGATCTCAAACCTGAGAACTTTTTGTTTGGAAACAAAAAGGAGACAGCACCTCTGAAAGCTATTGACTTTGGATTGTCGGTTATGTTCAAACCAGGTGAAAAATTTAATGAGATAGTTGGAAGTCCATATTACATGGCTCCTGAAGTATTAAAGCGTAATTATGGCCCTGAAGTGGATATTTGGAGTGCTGGAGTAATTCTTTACATCTTACTTTGTGGTGTCCCACCTTTTTGGGCAGAAACTGAACAGGGAGTTGCTCAAGCAATTATTCGATCTGTTGTTGATTTTAGAAGGGAACCATGGCCTAAGGTTTCTGATAATGCAAAAGACCTTGTAAAGAAGATGCTTGATCCTGACCCAAAGCGCCGGCTTACTGCAGAAGAAGTGTTAGATCATCCATGGTTACAGAATGCAAAGAAAGCTCCTAATGTTTCATTGGGAGAAACTGTTAGATCAAGGCTCATGCAATTTTCTGTGATGAACAAACTTAAGAAAAGAGCTTTGAGGGTGATCGCAGAGCATTTGTCTTCAGAAGAAGCTGCTGGAATAAAAGAGGGATTCGAACTGATGGATACAGGCAATGCAGGCAAGATTAACATTGATGAGCTGCGAGTAGGGTTGCAGAAACTAGGTCACCGAATTCCTGATGGAGATGTACAAATACTTATGGAAGCTGGTGATGCAGACAAAGATGGGTACCTAGATTATGGAGAGTTTGTTGCCATTTCCATTCATCTGAGAAAGATAGACCATGATGAGCACCTTCACAAAGCCTTCCAATTTTTTGATAAGAACCAAAGTGGATATATTGAAATTGAGGAGTTACATAATACCTTAGCTGATGAGATTGGAACAAACAGTGACGAAGTCATCAATGCAATTATGCATGACGTGGACACAGATAAGGATGGAAGAATAAGTTATGACGAATTTGCTGCAATGATGAAGGCTGGCACGGATTGGAGGAAAGCATCAAGGCAGTATTCAAGAGAGAGGTTTTCTAGTCTGAGTCAGAATTTGATCAAGGACGGGTCTTTGCAGTTAAACAATGGCGGAAGCTGA 3384 0.4323 MAALTTVHASLFPTNTTLPKPSSFQPFFSTQLLGLPLSSFSSSKRLSSFSCRPIKCSVSEATEPKTGEKKRQLLRRGDVRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQFVQERIMDSNDLERERGITILSKNTSVTYKDTKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHSVVVVVNKIDRPSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGKAGLSPENLAEDLGPLFESIIRCIPGPRIDKDGALQMLVTNIEYDEHKGRIAIGRVQAGVLEKGMDVRVCTSEDSCRFGRISELYVYDKFSRVPADNVEAGDICAVCGITDIQIGETIADKVSGKPLPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFVVSGRGTLHITILIENMRREGYEFMVGPPKVINKKLNEQLLEPYEIATVEVPEEHMGAVVELLGKRRGQMFDMQGMRSEGTTLLKYKIPTRGLLGLRNSILTASRGTAILNTIFDSYGPWAGEISTRDQGSLVAFEDGASTSYAISSSQERGQMFIGPGVEVYKGQIVGIHQRPGDLSLNVCKKKAATNIRSNKEQTVILDTPLDYSLDDCIEYIQEDELVEVTPASIRMCKNPKLAKKTRETKEEWACKSISKKKLRTAIDIEDVRREVEIMRHLPKHPNIVTLKDTFEDNNAVHLVMELCEGGELFDRIVARGHYTERAAATVAKTIVEVVQMCHKHGVMHRDLKPENFLFGNKKETAPLKAIDFGLSVMFKPGEKFNEIVGSPYYMAPEVLKRNYGPEVDIWSAGVILYILLCGVPPFWAETEQGVAQAIIRSVVDFRREPWPKVSDNAKDLVKKMLDPDPKRRLTAEEVLDHPWLQNAKKAPNVSLGETVRSRLMQFSVMNKLKKRALRVIAEHLSSEEAAGIKEGFELMDTGNAGKINIDELRVGLQKLGHRIPDGDVQILMEAGDADKDGYLDYGEFVAISIHLRKIDHDEHLHKAFQFFDKNQSGYIEIEELHNTLADEIGTNSDEVINAIMHDVDTDKDGRISYDEFAAMMKAGTDWRKASRQYSRERFSSLSQNLIKDGSLQLNNGGS* 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00284 1127 Pfam EF-hand domain pair 1027 1090 IPR002048 GO:0005509
Lapu7g00284 1127 FunFam GTP-binding protein TypA 380 486 - -
Lapu7g00284 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 279 IPR027417 -
Lapu7g00284 1127 NCBIfam small GTP-binding protein domain 80 228 IPR005225 GO:0005525
Lapu7g00284 1127 SUPERFAMILY Translation proteins 225 372 IPR009000 -
Lapu7g00284 1127 Gene3D - 918 1092 - -
Lapu7g00284 1127 Gene3D Translation factors 273 373 - -
Lapu7g00284 1127 CDD BipA_TypA_C 472 551 IPR035651 -
Lapu7g00284 1127 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 77 272 IPR000795 GO:0003924|GO:0005525
Lapu7g00284 1127 CDD EFh 1028 1090 IPR002048 GO:0005509
Lapu7g00284 1127 ProSitePatterns EF-hand calcium-binding domain. 1037 1049 IPR018247 -
Lapu7g00284 1127 ProSiteProfiles EF-hand calcium-binding domain profile. 1024 1059 IPR002048 GO:0005509
Lapu7g00284 1127 Pfam Protein kinase domain 670 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00284 1127 Gene3D Elongation Factor G (Translational Gtpase), domain 3 380 663 - -
Lapu7g00284 1127 NCBIfam translational GTPase TypA/BipA 79 668 IPR006298 GO:0003924|GO:0005525
Lapu7g00284 1127 CDD TypA_BipA 78 271 IPR047041 -
Lapu7g00284 1127 FunFam Calcium-dependent protein kinase 7 918 1093 - -
Lapu7g00284 1127 FunFam GTP-binding protein TypA 463 556 - -
Lapu7g00284 1127 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 118 133 IPR031157 -
Lapu7g00284 1127 SMART efh_1 956 984 IPR002048 GO:0005509
Lapu7g00284 1127 SMART efh_1 992 1020 IPR002048 GO:0005509
Lapu7g00284 1127 SMART efh_1 1064 1092 IPR002048 GO:0005509
Lapu7g00284 1127 SMART efh_1 1028 1056 IPR002048 GO:0005509
Lapu7g00284 1127 Gene3D Transferase(Phosphotransferase) domain 1 734 917 - -
Lapu7g00284 1127 CDD BipA_III 379 457 IPR047043 -
Lapu7g00284 1127 SUPERFAMILY EF-G C-terminal domain-like 377 461 IPR035647 -
Lapu7g00284 1127 ProSitePatterns EF-hand calcium-binding domain. 1073 1085 IPR018247 -
Lapu7g00284 1127 ProSiteProfiles EF-hand calcium-binding domain profile. 1060 1095 IPR002048 GO:0005509
Lapu7g00284 1127 FunFam GTP-binding protein TypA 557 643 - -
Lapu7g00284 1127 Gene3D Phosphorylase Kinase; domain 1 669 733 - -
Lapu7g00284 1127 ProSiteProfiles Protein kinase domain profile. 644 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00284 1127 Gene3D bipa protein 557 668 IPR042116 -
Lapu7g00284 1127 ProSitePatterns EF-hand calcium-binding domain. 1001 1013 IPR018247 -
Lapu7g00284 1127 Gene3D - 463 556 - -
Lapu7g00284 1127 CDD STKc_CAMK 665 908 - -
Lapu7g00284 1127 Pfam EF-hand domain pair 970 1015 IPR002048 GO:0005509
Lapu7g00284 1127 SUPERFAMILY Protein kinase-like (PK-like) 671 919 IPR011009 -
Lapu7g00284 1127 ProSiteProfiles EF-hand calcium-binding domain profile. 952 987 IPR002048 GO:0005509
Lapu7g00284 1127 Pfam Elongation factor G C-terminus 469 555 IPR000640 -
Lapu7g00284 1127 Pfam Elongation factor Tu GTP binding domain 79 269 IPR000795 GO:0003924|GO:0005525
Lapu7g00284 1127 SMART serkin_6 644 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00284 1127 FunFam GTP-binding protein TypA 76 272 - -
Lapu7g00284 1127 PRINTS GTP-binding elongation factor signature 145 155 IPR000795 GO:0003924|GO:0005525
Lapu7g00284 1127 PRINTS GTP-binding elongation factor signature 197 206 IPR000795 GO:0003924|GO:0005525
Lapu7g00284 1127 PRINTS GTP-binding elongation factor signature 125 133 IPR000795 GO:0003924|GO:0005525
Lapu7g00284 1127 PRINTS GTP-binding elongation factor signature 81 94 IPR000795 GO:0003924|GO:0005525
Lapu7g00284 1127 CDD BipA_TypA_II 279 372 IPR047042 -
Lapu7g00284 1127 FunFam calcium-dependent protein kinase 13 737 917 - -
Lapu7g00284 1127 Pfam Elongation factor Tu domain 2 293 362 IPR004161 GO:0005525
Lapu7g00284 1127 SUPERFAMILY EF-G C-terminal domain-like 472 587 IPR035647 -
Lapu7g00284 1127 Gene3D - 77 272 IPR027417 -
Lapu7g00284 1127 FunFam GTP-binding protein TypA 273 373 - -
Lapu7g00284 1127 SUPERFAMILY EF-hand 938 1115 IPR011992 -
Lapu7g00284 1127 SMART EFG_C_a 469 558 IPR000640 -
Lapu7g00284 1127 PANTHER SERINE/THREONINE-PROTEIN KINASE 636 1085 - -
Lapu7g00284 1127 ProSitePatterns Serine/Threonine protein kinases active-site signature. 771 783 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00284 Lapu-Chr7 3405115 3427358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00284 672 1122 EF-hand Containing Proteins AT5G19450 80.088 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Lapu7g00284 Pkinase 1.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00284 K06207 - gmx:100785222 1229.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00284 7 3405115 3427358 Lapu7g00284 7 3405115 3427358 ECH