Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00278 ATGCTTGGACAAGGGAATTGTCTCCTTAGATCACCATTTTTGCTATGTATACTCATTGGCCTCTTGATGCATTCTGTTGTGGGAGCTGAAATTCCCTTGGGTTCCAAACTTTCTGTGGTTGATAGTGATTATTGGGTTTCCTCCAATGGTGATTTTGCAATTGGATTCTTCAACATTTCAGATCAACCTAACCAGTTTAGTGTTGGAATTAGATTCAATTCCAAGTCTATACCATATAGCCAACAAACTATGGTTTGGGTTGCTGGGAGTGGTGTCACAGTTGGTAACGAGTCCTACTTTGAACTCACTCAGGACGGGGAACTGGTCCTGTTTGATTCCTTGCATGAAGCTTCTGTCTGGACCTCCAAAACGGGTAACCGATCTGTTGCTTCAGCTTCACTTCGTGACAATGGAAATCTAGTTCTAATGGACAAAGAGCAACACCTCATTTGGCAAAGTTTTGAGACTCCATCTGATACACTTCTCCCAGGACAAAGTTTATTTGCAAATGAAAAGCTTCGTGCTGCATCTACAAGCAAGAATAGCAAGTCCAGTTACTATAGTCTTCACATGAATGCTTCTGGGCATTTGGAGCTACATTGGGAAAGTGGTGTTATCTACTGGACAAGTGAAAACCCTTCTTCTGCTTCGAATCTCAGTGCTTTCCTTACAACCAGTGGAGCTCTAGAACTTCGAGACCAAAGATCGAAACCTGTTTGGTCTGCATTTGGAGAGGATCACAATGATTCTGTGAATTACAGATATCTTAGGCTGGATGTGGATGGGAATCTTCGCTTATATTCGTGGGTAGAAAGTTTGGGATTGTGGAGATCGGTGTGGCAAGCTGTTGAGAATCAGTGCAAGGTCTTTGCTACTTGTGGTCAACTTGGTGTCTGTGTCTTCAATGCCTCGGGTTCTGCTGAATGCAAATGCCCGTTTGAGGTAACTGGGGGTAACAAATGTTTGGTTCCATTTGAACGAGAGTGTGCATCTGGCACCAATATGATAGCATACAAGAACACATATTTATATGCATTCTACCCTCCTGTTAATTCTGTTATCACAAGTAATTTGCAGCATTGTGAACAATTGTGTCTGAATGATTCACAGTGTACAGCTGCAACTTTTTCCAATGACGGAACTCCACAATGCTCAATAAAGAAAACTGGGTATGTCACTGGTTATTCAGATCCCTCTGTAAGCTCAATATCATTTGTTAAGAGATGTTCAGGTCCATTTGCTGTAAATCCAAGTCTCACAAAATCTCCTCCTTCTGGACCACCTCCTCCTCTCTGTGTTTCTTGCCTAATGGGGGCTGCCACAGGCACATTTTTCATCATTGTTGTTCTCCAGTTGGGAATTATGTTCTTCATCTACAGAAGAAAAAACTCTACCAGGCAAAAGGCCACATTAGCTTTCACAGGCACAAACTCAAAGGGTTTAATTGTGTTGTCCTTCTCAGAAATCAAAAGCCTCACAGGGGATTTCAAGAATCAAATTGGGCCAAAGGTGTTCAAGGGTGTGCTACCAAACAATCATCCGATTGCGCTTAAAGACCTGAATGCGACCTTGGAAGAAAGGAAGTTCCGAAGTGCTGTTATGAAGATGGGTAGCATCCACCACAAGAACCTTGTAAAACTGGAGGGTTATTGTTGTGAGTTTGATCACAGGTTTTTGGTGTATGAATATTGCAAAAAGGGTTCAGTGGACAAGTACATAGATGATCCTGCACTTTGCAAGATGCTAACATGGAGAAAGAGAGTTGAAATATGCTCAAGTGTGGCAAAAGCCATATGTTATTTGCACTCCGGGTGCAGGGAGTTCGTAAGCCATGGAAATTTGAAATGCGAAAACATTATGTTGGATGAAAACTTGGGGGCCAAGGTGACAGAATTTGGGTTTGCTATTGCAGATGGCAAGGCAACATATTGTGGCTTTTCAGCTGAGAAGGATGTGGAGGACTTTGGCAAGTTAGTTTTAACCTTGTTAACCGGGTGTCGTGATGATGATCATGTGGAACTTTGCGGGTGGGCGTATAAAGAATGGATGGAAGAGAGGGTGGTGAATGTGGTTGATAGAAGAATGGAAGGGGGTTACAATTCAGAGGAACTGGAGCGTGTGTTGAGAATTGCATTTTGGTGCCTTCAAATGGATGAACGCAGGAGACCTTCCATGGGGGAGGTAGCAAGAGTAGTTGATGGTACATTGAGTGTTGATCCTCCACCACCTCCTTTTGCCTTTCAGAGGCCCTTGCAGGTAGATTATTCAGAAGAAAATGTTTCAGAGTTGGAAGTGTAG 2298 0.4291 MLGQGNCLLRSPFLLCILIGLLMHSVVGAEIPLGSKLSVVDSDYWVSSNGDFAIGFFNISDQPNQFSVGIRFNSKSIPYSQQTMVWVAGSGVTVGNESYFELTQDGELVLFDSLHEASVWTSKTGNRSVASASLRDNGNLVLMDKEQHLIWQSFETPSDTLLPGQSLFANEKLRAASTSKNSKSSYYSLHMNASGHLELHWESGVIYWTSENPSSASNLSAFLTTSGALELRDQRSKPVWSAFGEDHNDSVNYRYLRLDVDGNLRLYSWVESLGLWRSVWQAVENQCKVFATCGQLGVCVFNASGSAECKCPFEVTGGNKCLVPFERECASGTNMIAYKNTYLYAFYPPVNSVITSNLQHCEQLCLNDSQCTAATFSNDGTPQCSIKKTGYVTGYSDPSVSSISFVKRCSGPFAVNPSLTKSPPSGPPPPLCVSCLMGAATGTFFIIVVLQLGIMFFIYRRKNSTRQKATLAFTGTNSKGLIVLSFSEIKSLTGDFKNQIGPKVFKGVLPNNHPIALKDLNATLEERKFRSAVMKMGSIHHKNLVKLEGYCCEFDHRFLVYEYCKKGSVDKYIDDPALCKMLTWRKRVEICSSVAKAICYLHSGCREFVSHGNLKCENIMLDENLGAKVTEFGFAIADGKATYCGFSAEKDVEDFGKLVLTLLTGCRDDDHVELCGWAYKEWMEERVVNVVDRRMEGGYNSEELERVLRIAFWCLQMDERRRPSMGEVARVVDGTLSVDPPPPPFAFQRPLQVDYSEENVSELEV* 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00278 765 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 156 - -
Lapu7g00278 765 SMART ntp_6 330 408 IPR003609 -
Lapu7g00278 765 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 643 740 - -
Lapu7g00278 765 Pfam PAN domain 340 398 IPR003609 -
Lapu7g00278 765 Gene3D - 28 156 IPR036426 -
Lapu7g00278 765 PANTHER OS07G0415500 PROTEIN 12 746 - -
Lapu7g00278 765 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 460 563 - -
Lapu7g00278 765 Gene3D - 157 273 IPR036426 -
Lapu7g00278 765 Pfam Protein tyrosine and serine/threonine kinase 504 637 IPR001245 GO:0004672|GO:0006468
Lapu7g00278 765 Pfam D-mannose binding lectin 83 174 IPR001480 -
Lapu7g00278 765 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 564 642 - -
Lapu7g00278 765 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 211 IPR036426 -
Lapu7g00278 765 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 157 278 - -
Lapu7g00278 765 ProSiteProfiles Bulb-type lectin domain profile. 30 155 IPR001480 -
Lapu7g00278 765 PIRSF SRK 5 764 IPR024171 GO:0004674
Lapu7g00278 765 ProSiteProfiles Bulb-type lectin domain profile. 158 279 IPR001480 -
Lapu7g00278 765 Pfam S-locus glycoprotein domain 233 311 IPR000858 GO:0048544
Lapu7g00278 765 Gene3D Phosphorylase Kinase; domain 1 457 563 - -
Lapu7g00278 765 SUPERFAMILY alpha-D-mannose-specific plant lectins 183 278 IPR036426 -
Lapu7g00278 765 SUPERFAMILY Protein kinase-like (PK-like) 484 730 IPR011009 -
Lapu7g00278 765 ProSiteProfiles PAN/Apple domain profile. 329 409 IPR003609 -
Lapu7g00278 765 ProSiteProfiles Protein kinase domain profile. 468 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00278 765 ProSiteProfiles EGF-like domain profile. 283 322 IPR000742 -
Lapu7g00278 765 CDD B_lectin 46 157 IPR001480 -
Lapu7g00278 765 SMART blect_4 36 157 IPR001480 -
Lapu7g00278 765 Gene3D Transferase(Phosphotransferase) domain 1 642 739 - -
Lapu7g00278 765 Gene3D Transferase(Phosphotransferase) domain 1 564 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00278 Lapu-Chr7 3327426 3330668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00278 370 743 Receptor kinase-like Gene Family AT4G05200 27.378 1.23e-39 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lapu7g00278 PK_Tyr_Ser-Thr 1.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00278 - - vun:114192568 1406.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00278 7 3327426 3330668 Lapu7g00278 7 3327426 3330668 ECH
Lapu6g00355 6 3491295 3499498 Lapu7g00278 7 3327426 3330668 PCT