Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00267 ATGAATCACCTACCGTCGAACCTGTTGCCGGATGAAGGAAGCCCGGAGTGGATGAACAAGGGGGACAACACGTGGCAGTTAACGACGGGCACTCTGGTGGGCCTGCAAAGTGTTCCGGGCCTGGTCGTCCTCTACGGCAGCATAGTGAAGAAGAAATGGGCTTTGAACTCTGCGTTCATGGCCCTCTACGCTTTCGCGGTGGTTCTTGTTTGCTGGGTGGGGTGGTGCTACCAAATGTCGTTTGGTGAAAGGATTCTTCCATTTCTGGGACGCCCGAACGTGGCCTTGGACCACCAATTCCTTCTGCGCAAAGCTTTTTCCGGGGACTTTCCCAACGCCACTATGGTTTACTTTCAGCTCGTCTTTGCTGCTATCACTTTGATTCTCATCGCAGGGGCGTTGCTCGGGAGAATGAACTTCCACGCCTGGATGTTGTTTGTTCCACTTTGGCTCACCTTCTCTTACACCATCTGTGCCTTCAGTATATGGAGCACTGATGGATGGTTGTTCAAAATGGGCCTCGTTGATTACTCCGGTGGCTTTGTTATTCACCTTTCTTCTGGGGTTGCTGGTTTCATCGCAGCATCTTGGGTAGGGCCAAGGACAGTGAAGGATAGAGAGAGGTTCCTTCCAAACAACATACTTCTCATGCTGGCTGGGGCTGGCCTACTATGGATGGGGTGGACTGGATTCAACGGTGGAGATCCATACGCAGCCAGCATAGATGCATCTCTGGCCGTTCTTAACACCCACGTCTGCACGGCCATGAGTTTGTTGACTTGGCTTTTCCTTGACATCCTCTTCTTTGGAAAACCTTCGGTGATTGGTGCCACTCAAGGCATGATCACTGGTTTGGTTTGCATCACCCCTGCTGCAGGTTTGAGTTTAGGTGTGGTGCAAGGTTGGGCAGCAATGATAATGGGAATGATGTCAGGAAGCATCCCATGGTACACAATGATGGTCCTGCACAAAGAAATTAGGCTCCTCAAACAGGTGGATGATACCATGGCAGTTTTCCACACTCATGCAGTGGCTGGCTGCTTAGGTGGCATTCTGGCTGGCTTCTTTGCTGACCCTGACCTTTGCCGTCTCTTCTATGGGGTCCAGGATTCGCTGCACTATACAGGCCTTGCTTATGGCATATTCACAGGGAGGCCTAAGGCAGGGTTCAGGCAAATGGGGGTTCAGCTTCTTGGCATTGTGTTTGTGATACTTCTCAACGTCACCACAACTAGTATTGTGTGTTTGGTTGTTAAGACCATAGTACCTCTGAGGCTGCAGGAAGAAGACTTGGAAGTTGGGGATGATGCAGTCCACGGTGAGGTTGCATATGCACTGTGGGGCGATGGAGAGAAGCTTGAGACTGCCAAGGAAGCTTTGAGTTTTGAGAAGAATCATGAATGGCCAAATGTGGAACTAAAAACTTCTAGTGATGCTCAGTTGGAGTGA 1449 0.5052 MNHLPSNLLPDEGSPEWMNKGDNTWQLTTGTLVGLQSVPGLVVLYGSIVKKKWALNSAFMALYAFAVVLVCWVGWCYQMSFGERILPFLGRPNVALDHQFLLRKAFSGDFPNATMVYFQLVFAAITLILIAGALLGRMNFHAWMLFVPLWLTFSYTICAFSIWSTDGWLFKMGLVDYSGGFVIHLSSGVAGFIAASWVGPRTVKDRERFLPNNILLMLAGAGLLWMGWTGFNGGDPYAASIDASLAVLNTHVCTAMSLLTWLFLDILFFGKPSVIGATQGMITGLVCITPAAGLSLGVVQGWAAMIMGMMSGSIPWYTMMVLHKEIRLLKQVDDTMAVFHTHAVAGCLGGILAGFFADPDLCRLFYGVQDSLHYTGLAYGIFTGRPKAGFRQMGVQLLGIVFVILLNVTTTSIVCLVVKTIVPLRLQEEDLEVGDDAVHGEVAYALWGDGEKLETAKEALSFEKNHEWPNVELKTSSDAQLE* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00267 482 PANTHER AMMONIUM TRANSPORTER MEP2 6 456 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lapu7g00267 482 Pfam Ammonium Transporter Family 25 444 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lapu7g00267 482 NCBIfam ammonium transporter 22 444 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lapu7g00267 482 PRINTS Rhesus blood group protein signature 215 233 IPR002229 GO:0005886
Lapu7g00267 482 PRINTS Rhesus blood group protein signature 246 268 IPR002229 GO:0005886
Lapu7g00267 482 PRINTS Rhesus blood group protein signature 119 135 IPR002229 GO:0005886
Lapu7g00267 482 PRINTS Rhesus blood group protein signature 305 323 IPR002229 GO:0005886
Lapu7g00267 482 FunFam Ammonium transporter 7 447 - -
Lapu7g00267 482 Gene3D Ammonium transporter AmtB like domains 9 463 IPR029020 -
Lapu7g00267 482 SUPERFAMILY Ammonium transporter 17 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00267 Lapu-Chr7 3142498 3144213 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00267 113 467 Inorganic Solute Cotransporters AT2G38290 58.873 5.85e-140 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00267 K03320 - gmx:112999382 851.662