Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00260 ATGATTCCGAAGACTCTGTTACAGTACCTATCATTCGCGTTAGGGTTTCTGCTGTGCTCCACAATCCCTTTCGCTGACGCCGAGTCGTCCACGTGCTTGACGGTCTACAAAAACGGCGGTGCTCCGGCGGTGTTTCAGTCCCCGAAATGCCCCCGCTGGAAGCTCTCCGACTACGATTCCCCTCCCCAAACCACCGCGCATTGCCAGATTGCGATGCTCCAAGGCCGCAGAAACTCTCAAGAGGATCGCGCTCTCTGCGTCCTCGATGTTCGCATTCCCTTCCCCGGTGCGAACGGGGTCAAGGAGGTTGCGGTTGGCATTGTGGCCGTTTTCGATGGTCATAACGGTGCAGAAGCTAGTGAGATGGCATCGAAACTTTTGTTGGAGTATTTTGTTCTGCATACTTATTTTCTTCTCGATGCCGCCTTTTCTGTTATTTCGAAGACGTCAACGGACACATTGCTTCACAAGAGAGACCGTAATCATGTAAACTTAAAGAACAGATGGAAGGAGATTCTAGGTTTAGAATGGCATGAACTGCATTTTGAAAGGTTTCAGAATACATTTTCTCCAAATTTTGATGATTCTTTTCACTTCGAAATTTTGAAGGAAGCGTTATTGAGAGCAGTCCATGACATTGATGCTAAGTTTTCTGAGGAAGCCTCTAGAAATAATCTTCACTCAGGATCAACAGCTACCATTGTTTTGGTAGCGGATGATAAAATTTTGGTTGCCAATATTGGAGACTCTAAGGCCATCCTGTGCTCTGAAAATTTTCAGTCTCCCAGAGAGGCTAAAGACTTATTATTAAAGCTATATAGGCAGAAAGAGCATGACGGTTCTGTTTCCATGTGGGATCGTGAAAAGTACAAACTGGCTTCATCCCATGGTCTCATTCATTTTGCAGTAAAGGAATTGACCAGTGATCATCATCCAGACAGAGAAGATGAAAAAAATCGGGTGGAAACAGCTGGCGGTCAAGTTCAAAATTGGGGTGGTGTGCCTCGCATAAATGGTCAGCTGGCTATTACACGAGCTATCGGTGATGTACCCTTTAAAAGTTATGGTGTTATATCTGCACCAGAAGTGACTGATTGGCAGCCACTGACTGCTAATGATAGCTATTTGGTGGTAGCATCAGATGGTGTATTTGAGAAGATGAGCTTGCAGGATGTTTGTGATTTGTTGTGGGAAGTGCACCGTCACAGTAACATGAGATCAGAGTGTACCCCTTCTTCCTATTCGTTGGCAGATTTAATTGTTAATAATGCCTTCAAAAAGGGCAGTATGGACAATGTGGCAGCCATTGTCATTCCTCTGGAGTCTGTCAAGTATTCTCCAAACTTGCATAGGGGAAGTTATATTGGAAAGAGGGATGCAGGTTTCCCATTATTTGGTTTGCAGGAAACTTCCTTCAAAAGCTCAGGTATTAATGGCATCTCGTCTGATCTTATGCACTTGGAGCACCCTCATCTGGTAGATACTAAGTTTAAGCGAATATTGGTTGAAGTAAAAGATGGTGATTTTGGCTGTTTTTATTTATCTGAAAATCTTGATGAACCCGAGGAAACCAAGCAGATTGCGAAAAAAACTGACTGGGATGACTATTTGTATGAACTACCTTCGCCTCTACCAGATGCCCTTTGTCAACATGCCACTTCAGGTGGTCTTGTAAATTTATACAATAACCAAAATTTTTGCTTTCACCTTGGTCCAACTGTTAATGAAGCTGAAGACCGATGCATAAATCCTGAAGGCTTTGCTAGTTTCATTGGTCTTCTTGAATCAATTCCTTTACATGATACTGATTCCAGTAATGGGTCTTCTGATTATTCAATGCCTGATTTGAGGTATGTGTTGAAGAAGAGTTTTGGACGTGGATCATTTGGTGAAGTGTGGTTGGCTTTTCATTGGAATTGTAATCAAGATTGTAATGCTGCAAAAAGGAGCAGGGATGGTACAGATACAAACAACAGCTCAACTGCTTCTGATTGTCAGAATGGTCCTTCTAACTACACCCTGTACATTTTGAAACGTATAATGGTGGAGAGGGGTTCAGCTGTTTACTTAAGTGGGCTAAGGGAGAAGTACTTTGGAGAAATTTTTTTAAATGCCTCTACATGCTTTGAAGACCCACTATCGGCTGGAAAATCAAACTGTGTCTTGGAATCATCATCACAGTTTGGTCCTGAGAAATCATTTCCAAACAAATTTCGGCTACAAAGAGCCCCATATGAAGAAGGTTTGAACCATATTGCAAGATATGTGGAATCTTTTGAGTCTCAAGCAAATGAAATTTGGCTCGTATTTAGTTATGAAGGTGTGTCTCTGTCGAAACTTCTATATTCTGCGGAAGACGCATACAATAATTCAGAGCAAGAAAGACTTGAGCAAGCTAAACATATTCAGATATTACGACCATCAAAGTGGTGGCATTGGTTGAAAACATCAGAAGAAGGGCAAGCAGAAATGCGCAACCTTATCTGGCAGCTGTTATTAGCTCTAAAGTCCTGTCATGATCGCAACATCACACACAGAGATATCAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAAACAGGGAGATGCTTGAAAGAAATTCCGACTAAAGTTAATAATTTTTCCACCAAAATGCGTATTATTGACTTTGGAAGTGGAATTGATGAATTCACATTAAAGAATTTATATGGTTCCCCTGGGCCTTCGAGAGCCGAACAAACCTATGAGTATACCCCTCCTGAAGCTTTACTAAACACTACATGGTATCAAGGGCCAACAAGCTCAACTTTGAAATATGATATGTGGAGTGTTGGTGTTGTTATGTTAGAGTTGGTCTTAGGGACACCAGATGTTTTCCAAATTAATGTTATAACACGGGCCCTATTAGATCGACATCTAGAAGGCTGGAATGAGGGCGTGAAGGAGCTTGCATATAAACTTAGATCATTCATGGAATTGTGCATTTTAATCCCTGGGATCTCCAGGTCCAGCAGTTTCTCAAAAAAGTATCACACAGTGAACCAAGTTGGAGTTTCACCTGCATCTTGGAAATGCTCCGAAGAATTTTTTTCACGTCAAATTAAGAATCGAGATCCCCTTAAAATAGGTTTTTCAAACATTTGGGCTTTACGGTTAGTGCGCCGTCTGTTACATTGGGATCCAGAGGATCGGCCAAGTATTGATGAGGCTCTTCAACATCCTTATTTCCAACATCCCCGTGGAGAGTGA 3234 0.4202 MIPKTLLQYLSFALGFLLCSTIPFADAESSTCLTVYKNGGAPAVFQSPKCPRWKLSDYDSPPQTTAHCQIAMLQGRRNSQEDRALCVLDVRIPFPGANGVKEVAVGIVAVFDGHNGAEASEMASKLLLEYFVLHTYFLLDAAFSVISKTSTDTLLHKRDRNHVNLKNRWKEILGLEWHELHFERFQNTFSPNFDDSFHFEILKEALLRAVHDIDAKFSEEASRNNLHSGSTATIVLVADDKILVANIGDSKAILCSENFQSPREAKDLLLKLYRQKEHDGSVSMWDREKYKLASSHGLIHFAVKELTSDHHPDREDEKNRVETAGGQVQNWGGVPRINGQLAITRAIGDVPFKSYGVISAPEVTDWQPLTANDSYLVVASDGVFEKMSLQDVCDLLWEVHRHSNMRSECTPSSYSLADLIVNNAFKKGSMDNVAAIVIPLESVKYSPNLHRGSYIGKRDAGFPLFGLQETSFKSSGINGISSDLMHLEHPHLVDTKFKRILVEVKDGDFGCFYLSENLDEPEETKQIAKKTDWDDYLYELPSPLPDALCQHATSGGLVNLYNNQNFCFHLGPTVNEAEDRCINPEGFASFIGLLESIPLHDTDSSNGSSDYSMPDLRYVLKKSFGRGSFGEVWLAFHWNCNQDCNAAKRSRDGTDTNNSSTASDCQNGPSNYTLYILKRIMVERGSAVYLSGLREKYFGEIFLNASTCFEDPLSAGKSNCVLESSSQFGPEKSFPNKFRLQRAPYEEGLNHIARYVESFESQANEIWLVFSYEGVSLSKLLYSAEDAYNNSEQERLEQAKHIQILRPSKWWHWLKTSEEGQAEMRNLIWQLLLALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEIPTKVNNFSTKMRIIDFGSGIDEFTLKNLYGSPGPSRAEQTYEYTPPEALLNTTWYQGPTSSTLKYDMWSVGVVMLELVLGTPDVFQINVITRALLDRHLEGWNEGVKELAYKLRSFMELCILIPGISRSSSFSKKYHTVNQVGVSPASWKCSEEFFSRQIKNRDPLKIGFSNIWALRLVRRLLHWDPEDRPSIDEALQHPYFQHPRGE* 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00260 1077 CDD PP2Cc 74 440 IPR001932 -
Lapu7g00260 1077 Gene3D - 63 445 IPR036457 -
Lapu7g00260 1077 PANTHER PROTEIN PHOSPHATASE 63 439 IPR015655 GO:0004722|GO:0006470
Lapu7g00260 1077 Pfam Protein kinase domain 820 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00260 1077 ProSiteProfiles Protein kinase domain profile. 618 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00260 1077 FunFam uncharacterized protein LOC106771884 isoform X8 809 1072 - -
Lapu7g00260 1077 SMART serkin_6 618 1071 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu7g00260 1077 SMART PP2C_4 61 438 IPR001932 -
Lapu7g00260 1077 ProSiteProfiles PPM-type phosphatase domain profile. 67 440 IPR001932 -
Lapu7g00260 1077 SUPERFAMILY Protein kinase-like (PK-like) 617 1073 IPR011009 -
Lapu7g00260 1077 Gene3D Transferase(Phosphotransferase) domain 1 808 1072 - -
Lapu7g00260 1077 Pfam Protein phosphatase 2C 202 433 IPR001932 -
Lapu7g00260 1077 ProSitePatterns Serine/Threonine protein kinases active-site signature. 843 855 IPR008271 GO:0004672|GO:0006468
Lapu7g00260 1077 SUPERFAMILY PP2C-like 66 441 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00260 Lapu-Chr7 2986160 3026390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00260 682 1074 PP2C-type Phosphatase Gene Family AT3G63340 64.631 7.23e-172 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Lapu7g00260 Pkinase 2.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00260 - - gmx:100781476 1982.61