Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00253 ATGGGTAGTAGTGTAGATTATGAGTACCCTTTGGAGATGAACGTAGTTGAGAGTGTGCAGCAGCAGCAGCAGCAAGTGGAGATTCCTCCACCTCAACCATTTTTTAAGTCTTTGAAATACTCCTTGAAGGAGACCTTCTTCCCAGATGATCCTTTGAGGCAGTTCAAAAACAAACCACCCTCCAAAAAGTTCATGCTTGCCATTCAGTATTTCTTCCCCATCTTCGAATGGGCACCCAAATACACCTTCAACTTCTTCAAAGCTGATCTCATAGCTGGAATCACCATAGCTAGCTTGGCCATTCCCCAAGGCATCAGCTATGCCAAACTCGCAAATCTCCCTCCAATCCTCGGACTATACTCAAGCTTTATACCACCGTTGATCTATGCCATGATGGGAAGCTCCAGGGATTTGGCGGTGGGGACAGTGGCCGTGGGATCGCTTCTGATGGGTTCCATGTTGAGTGATGAGGTTAATCCCAATGAAGATCCAAAGCTTTACCTACACCTTGCCTTCACTGCTACATTATTTGCTGGAGTTTTTCAGGCTGCTTTGGGTTTGTTTAGGTTGGGGCTGATAGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCTACAGTGGTTTGTCTGCAGCAACTAAAATCCATTCTTGGCCTTGTACATTTCACCCATGGAGCTGATATCATATCAGTGATGCGCTCTGTTTTCACCCAAACTCATGAGTGGAGGTGGGAAAGCTCTGTGTTAGGATTTGTCTTCATTTTCTTTCTCCTTATCACTAGATACTTCAGCAAAAAACAACCAAGATTTTTTTGGGTGTCAGCAATGGCGCCATTAACATCGGTTATATTAGGAAGTCTGTTGGTTTATTTCACTCACGCCGAGAAGCACGGAGTTGAAGTGATAGGAGAATTGAAGAAGGGTTTAAATCCACCATCAGTCACAAAGCTGGTTTTTGTATCACCTTATATGGCCACAGCTGTCAAAACTGGCATTGTGGTTGGCATCATATCACTAGCAGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTATAAAAATTACAATACTGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGACCATTCTCACGCTCAGCCGTGAACTATAATGCTGGATGCAAGACAGCAGCATCCAACATTATAATGTCAATTGCAGTCATGTTGACATTGTTATTCCTAACACCCTTGTTCCATTACACTCCCCTGGTGGTGCTATCAGCCATCATTGTATCAGCAATGCTTGGCCTCATAGATTATGAAGCAGCCATCCATCTGTGGAAGATTGACAAGTTTGACTTTGTTGTGTGCATGAGTGCATACATTGGCGTGGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCTGTTGCAATATCTGTACTTCGAGTACTTCTATTCATTGCAAGGCCAAGGACATTCATTTTGGGAAACATTCCAAATTCTGGGATATACAGAAATGTTGAGCAATATCCAAATGCAAAACACGTTCCTGGAATTCTAATTCTAGAGATTGATGCACCTATATACTTTGCCAATGCAAGCTATTTAAGAGAAAGGATCACAAGATGGGTTGATGAAGAGGAAAACAGAATCAAAGCTACTGGAGATACAAATTTGCAATTTATTATAATGGATATGAGTGGTGTTGGAAACATTGATACAAGTGGAATAAGTATGCTTGAAGAGGTCAAGAAGATTACTGAGAGAAGAGAGCTTCAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAACTGAACAAATCGAAGTTCCAAAATCATTTAGGCCAGCAATGGATCTATCTAACTGTAGAAGAGGCCGTTGGAGCATGCAACTTCAATCTTCGTGCAAGTAAAACGAATCTCAACAAAGATGAATCAGAGGGTTGGAACAATGTTTGA 1989 0.4228 MGSSVDYEYPLEMNVVESVQQQQQQVEIPPPQPFFKSLKYSLKETFFPDDPLRQFKNKPPSKKFMLAIQYFFPIFEWAPKYTFNFFKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSDEVNPNEDPKLYLHLAFTATLFAGVFQAALGLFRLGLIVDFLSHATIVGFMGGAATVVCLQQLKSILGLVHFTHGADIISVMRSVFTQTHEWRWESSVLGFVFIFFLLITRYFSKKQPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVEVIGELKKGLNPPSVTKLVFVSPYMATAVKTGIVVGIISLAEGIAVGRSFAMYKNYNTDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIIMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRVLLFIARPRTFILGNIPNSGIYRNVEQYPNAKHVPGILILEIDAPIYFANASYLRERITRWVDEEENRIKATGDTNLQFIIMDMSGVGNIDTSGISMLEEVKKITERRELQLVLVNPGSEVMKKLNKSKFQNHLGQQWIYLTVEEAVGACNFNLRASKTNLNKDESEGWNNV* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00253 662 Gene3D STAS domain 497 643 IPR036513 -
Lapu7g00253 662 ProSiteProfiles STAS domain profile. 517 640 IPR002645 -
Lapu7g00253 662 NCBIfam sulfate permease 73 636 IPR001902 GO:0016020|GO:0055085
Lapu7g00253 662 Pfam Sulfate permease family 86 466 IPR011547 GO:0016020
Lapu7g00253 662 Pfam STAS domain 518 636 IPR002645 -
Lapu7g00253 662 FunFam Sulfate transporter 31 497 643 - -
Lapu7g00253 662 PANTHER SULFATE TRANSPORTER 35 643 IPR001902 GO:0016020|GO:0055085
Lapu7g00253 662 ProSitePatterns SLC26A transporters signature. 115 136 IPR018045 GO:0008271|GO:0008272
Lapu7g00253 662 SUPERFAMILY SpoIIaa-like 519 640 IPR036513 -
Lapu7g00253 662 CDD STAS_SulP_like_sulfate_transporter 518 633 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00253 Lapu-Chr7 2911900 2918584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00253 21 662 Inorganic Solute Cotransporters AT4G02700 66.563 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00253 K17471 - gmx:100810196 1207.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00253 7 2911900 2918584 Lapu7g00253 7 2911900 2918584 ECH
Lapu1g02131 1 35430738 35442811 Lapu7g00253 7 2911900 2918584 PCT