Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00242 ATGCCAAGTACAACAAATCTCAGGCACCTCAACCTCAGCATGAACCTCAACATCTGTTGCTCAAACTCAGCTACTCCTGAATCAGAATCTCCTCCATTGAGCCCCGTTACTTCTTCCTCACATCATAACACTCATTGTCCATCTCCTTCTTCCATTATGATAAAGAACTTCAACTCTATCTATGACCCTACCTTAACCTCTGACCACTCTTTCACCTCCACTTTCTTCTCCACCACCACCTTCTTCGAACCAGAACCTGAACCCCAACCCGCCGACTTCGCCACCGCTTTCGCCTCTCAGAGGTTCTTCTTCTCTTCCCCCGGCCATTCCAACTCCCTCCTTGAATACACCAACACCAACAAAACCACTCAACAGCACTCACCGTCGTTGAGACAAGATGGTGATGTTGAGAAGCTGAAGTTGAATAAGAAGCTGTTGTTCAAGGGGAGCGTGGCGGTGGCGACGTACTCGCCTGACCCTTACGTGGATTTCCGGCGGTCGATGCAGGAGATGGTGGAGGCGCGTCCGGAGCTGATGGACGTGAAGTCCAACTGGAATGTGTTGCATGAGCTTCTTCTCTGCTATCTTGCGCTCAACCCAAAGAGCACCCACAAGTTCATTCTTGGTGCTTTTGCTGATCTCCTCGTTAGCCTCATGTCTTTCTAG 666 0.5 MPSTTNLRHLNLSMNLNICCSNSATPESESPPLSPVTSSSHHNTHCPSPSSIMIKNFNSIYDPTLTSDHSFTSTFFSTTTFFEPEPEPQPADFATAFASQRFFFSSPGHSNSLLEYTNTNKTTQQHSPSLRQDGDVEKLKLNKKLLFKGSVAVATYSPDPYVDFRRSMQEMVEARPELMDVKSNWNVLHELLLCYLALNPKSTHKFILGAFADLLVSLMSF* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00242 221 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 51 218 IPR038933 GO:0045892
Lapu7g00242 221 Pfam Transcriptional repressor, ovate 157 218 IPR006458 -
Lapu7g00242 221 MobiDBLite consensus disorder prediction 23 45 - -
Lapu7g00242 221 ProSiteProfiles OVATE domain profile. 153 217 IPR006458 -
Lapu7g00242 221 NCBIfam uncharacterized plant-specific domain TIGR01568 151 219 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00242 Lapu-Chr7 2757768 2758913 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu7g00242 Ovate 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00242 - - gmx:102663296 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00242 7 2757768 2758913 Lapu7g00242 7 2757768 2758913 ECH
Lapu1g02142 1 35578861 35579589 Lapu7g00242 7 2757768 2758913 PCT