Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00241 ATGAGAGAGGGGCTGAGATCGCGGGCGCGATTGGGGACGGTTTCTGGAGGCGATGGAGTTGTTCACAAGAAAAAAGTTGTTGTGAAGAGCGAGGCTGTTGATTTGGGTGGTGAGGGTTTGGAGGTGCAGAACTCAACGATTGAGAAGAAGGGTGAAGTTGCACGTGATGTGAAAGAAGAATGTGGCTTTGATTTGAATGTGTGTGCGAGTGGAGAGGTTGACTTGGATGAGAATGGGAGTGGTAGGAGTTGTTTTAGTGGTGAGGGTAGTGTTGTAGTAGCTGAGGTAGATAGGAAGGCAAAGAAGGAACAAGGTTCAAATAATGAAGTGCTGGTTGGCGGTCGAGTGTTGCGCTCGAGGTCTAAGGGGGGGAAGGATAGAAGAGTGTATTATGGAGAGAATGAGGATGTTGTTTCTGAGAGTGATAGAGAATGTAGTGTGTTTGAGAGGGTGAAAGTTAAGACGGAATGTGAAGAAGCTGATGAATTTTTGGCTGACAGTTGTGAGGATGAAAAAGCTAAGGTGAAGAAGGCAGGGAATGGCACGAGGAATTTGAAAAGGAAGCGTGGAAGGCCTCCCAAAATAGATTTGAAAGTGGAAGATCAATCAGTTGATCGGTTGCCACGGAAGCGTGGGAGACCCCCTCTGGCCAGCAAACAAAACCATGTGGTGGTACATAATAGAAAAGGAAAGACTGCCCTTCGAAAAGATAAAACGGGTTTAACTACTAGACATGATGCTAATGTGAATTCTATTGATGATACAAATTCAAGGAAATCTGCTGGGGATGAGTTAGAAAATAAGGAAGTCTCTCCTGTGAAGAAGTCTAAATCTAGTAAGGATTTGGAAACTGGCAACAATGTGGTGTCCTCACCATTAAGATCAAATACCGAGAATGCACTTATCGCTGAGAAAAGTGGAAAGAATAGAGTAAAGCAGTTAGTGAGGGACCAAATAAAGGAAATTCTCTCAGCTGCAGGCTGGACAGTTGACTACAGACCTAGGAATGGTAGAGAGTACCACGATGCAGTTTATGTTAGTCTGGACGGACACACACACTGGTCAATCACCTTGGCCTACAAAAGGCTTAAAGAGTATTATGAAGCTGGTAATGGTGAAGGCAAGGCATATGGGCCAGGCTTCCAATTTACGCCAATACCAGCCGAGGATTTCAATATACTTACTAAGGTAATTAACAAGCAAAGAAATAGTAAAGATAAATTTGTAAAGAAAGGGGGAAAGGGTGGAAAGAAAGTCGATTTTGTCAGTGGTAACAAAAACAAGGAGAGGTCAGGTTCTGGAGCAGCGGCGGGTAAGTCAGTGAAGAGGAAAATGAAGAGGAAATGGTCAGTTGTAGACACAGATGCTATATCACCTAACAGGATGCCAGTTCTTGTGAGGAATCATAAGCGACACAAAACACAAAATAAGCTGCGAAGTGCTCCGTTGGTTCGTAATGCTGAGGAGATAGATTCAGAAACTGAGGGATATGTTCTGTACAGTGGAAAAAGAACTTTGTTTGCCTGGATGATTGATTTGGGGACAGTCCTTCTAAATGGGAAGGTTCATTATAAGGTACCCGATGGTAAAAGTACTTTACTGGATGGTAAGATCACAGGAGATGGCATTCAATGTGGCTGCTGTAATAAAATCATTACAATTTCAGAATTTGAAGTTCATGCAGGAAGCAAATTTGCTAATCCACTTCAAAATATATATGTGGAGGAAGGAAAGTCTCTTTTACAGTGCTTGCTAGATTCATGGAACAAGCAAGATGAATCTGAACGAAATGGTTTTCATTTTGTTGATGTTGCGGGTGAAGATCCAAATGACGATACTTGTGGGGTTTGTGGAGATGGTGGAGACCTGATATGTTGTGATGGTTGCCCATCAACATTCCATCAAGACTGCTTGGATATACAAAAGTTTCCATCTGGTGATTGGCACTGCATTTATTGCTGTTGCAAATTTTGTGGGTCTGTTAATGATTGTTCAAACCAAAAGGACGATGATGATGATCTTACTGTGTCAAAATTACTCACATGCCGACTATGTGAGCAAAAATATCACAGATCCTGTATTGAGGTACATTATTGCAATACTATTGATTCCAGTGATGTTTTCTTTTGTGGAAACAGATGTCAAGAGTTATCTGAAGGACTTGAAATGCTCCTAGGGGTTAAACATGAAATTGAAGATGGATATTCGTGGACTTTTATTCGGCGGTCAGATGTTGGCATTGATGCTTCTAAGATAAAACCTCAGATGGTTGAATGTAATTCTAAGCTTGCTGTTGCATTATCAATAATGGATGAGTGCTTCATGCCATATATTGATCATAGAAGTGGGGTTAATCTGATCCACAGTATTCTGTACAATCGTGGGTCAAATTTCAATCGTCTGAGCTATAGTGGATTTGTTACTGCAATTCTAGAGAGAGGTGATGAGATAATTTCTGCTGCATCTATCAGGATCCATGGGAACCAACTAGCAGAGATGCCATTTATTGGAACCCGCTACATGTACAGGCGACAAGGAATGTGCCGCCGGCTTCTAAATGCCATTGAATCGGGACTCGGCTCTTTAAATGTTGAGTTATTGGTGATACCAGCGATCTCGGAACTCAGAGAAACTTGGACTTCCGTTTTTGGGTTTGAGCCACTTGAATCAACAATCAAGCAAATAATACATAATAGGAATCTGTTGGTATTTCCTCATGTAGATATGTTACAGAAGAAGATATCAGAACATGGATTGGCTGGTCATAATAATCCGATTCCTTCAGACGCTTTCAATCTTCAAACCGATCAAATAGAAAATAATTGTAATGGAGCGGGATCATCTGGATCTGATTTGATCAATCATATTGAGATTCCTCCCCGCCCTAATACATGCCAGATAAAGGATGAAACCATATCTACTGAATCTCATTGTCATCTTCCCAAGGGTTCATTGACTAATGTACCTGACATTGCTAGCAACATTAATGATTATAGGCAATCTTCAAAAGATGACGTATGTCAAGTTGTACGTCAGACAGGTGATGGGAATCCGGTGATGGACAACAGTATTAAAGATGCCTGTGAACATGTGACTGATACTTGTTGCCTAGCTGGAGATAGCCAGTTGAACAATTGCACGGTTCCTTATGAAGAAAGACCGTGTCTCACATCTTGTATTAACACTGAGGCTACAGAAGGACAGTGTGTTAATGTTTCGTTGGAGGTTACTGAAAACTTTCCTAATCGTGTGGAAGTATCAAATGAAGTTATATCAAATAACAAAAGTGGCGAAGACTCGGAACCCTGTGGTGCAGAAAGTATTACAAGGGATTCAAAAGTTTCTGCTGACCCTATTCACCAGGATTCACATATAATTTCTGACAGTTGTGAACTGAGAAGCAACATTGATTGTGGTCAACCAAACTTCATAGGAACAAAAGAAAAAAATGGTGAACATGTTAGTGTTTGTGGTTCTCATTGTAGACCCAATGGTGATTGTGCCTCTGGTGAAGGTGCTTCGGCCACTAACGTCTTATTGCACCGAACGTCACAGGACATCACCAATAACAAGCCTTGGGTGAAAGGGTCTTCAGAGCTACCTGAGCCTGATTTGCAGGTTGATCAAACTGAACGGAGCAGTGGTCCCTCGCCGTGGAGCCCTAACACTGCTTCTGGTTGTGCATCTACTGGCAGTGCATCTCGAGGTAGTACAGAGGGGATATTTTTGTCAAACCAAGCCAGTTGA 3747 0.419 MREGLRSRARLGTVSGGDGVVHKKKVVVKSEAVDLGGEGLEVQNSTIEKKGEVARDVKEECGFDLNVCASGEVDLDENGSGRSCFSGEGSVVVAEVDRKAKKEQGSNNEVLVGGRVLRSRSKGGKDRRVYYGENEDVVSESDRECSVFERVKVKTECEEADEFLADSCEDEKAKVKKAGNGTRNLKRKRGRPPKIDLKVEDQSVDRLPRKRGRPPLASKQNHVVVHNRKGKTALRKDKTGLTTRHDANVNSIDDTNSRKSAGDELENKEVSPVKKSKSSKDLETGNNVVSSPLRSNTENALIAEKSGKNRVKQLVRDQIKEILSAAGWTVDYRPRNGREYHDAVYVSLDGHTHWSITLAYKRLKEYYEAGNGEGKAYGPGFQFTPIPAEDFNILTKVINKQRNSKDKFVKKGGKGGKKVDFVSGNKNKERSGSGAAAGKSVKRKMKRKWSVVDTDAISPNRMPVLVRNHKRHKTQNKLRSAPLVRNAEEIDSETEGYVLYSGKRTLFAWMIDLGTVLLNGKVHYKVPDGKSTLLDGKITGDGIQCGCCNKIITISEFEVHAGSKFANPLQNIYVEEGKSLLQCLLDSWNKQDESERNGFHFVDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHQDCLDIQKFPSGDWHCIYCCCKFCGSVNDCSNQKDDDDDLTVSKLLTCRLCEQKYHRSCIEVHYCNTIDSSDVFFCGNRCQELSEGLEMLLGVKHEIEDGYSWTFIRRSDVGIDASKIKPQMVECNSKLAVALSIMDECFMPYIDHRSGVNLIHSILYNRGSNFNRLSYSGFVTAILERGDEIISAASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLLNAIESGLGSLNVELLVIPAISELRETWTSVFGFEPLESTIKQIIHNRNLLVFPHVDMLQKKISEHGLAGHNNPIPSDAFNLQTDQIENNCNGAGSSGSDLINHIEIPPRPNTCQIKDETISTESHCHLPKGSLTNVPDIASNINDYRQSSKDDVCQVVRQTGDGNPVMDNSIKDACEHVTDTCCLAGDSQLNNCTVPYEERPCLTSCINTEATEGQCVNVSLEVTENFPNRVEVSNEVISNNKSGEDSEPCGAESITRDSKVSADPIHQDSHIISDSCELRSNIDCGQPNFIGTKEKNGEHVSVCGSHCRPNGDCASGEGASATNVLLHRTSQDITNNKPWVKGSSELPEPDLQVDQTERSSGPSPWSPNTASGCASTGSASRGSTEGIFLSNQAS* 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00241 1248 MobiDBLite consensus disorder prediction 405 440 - -
Lapu7g00241 1248 MobiDBLite consensus disorder prediction 405 425 - -
Lapu7g00241 1248 MobiDBLite consensus disorder prediction 170 292 - -
Lapu7g00241 1248 MobiDBLite consensus disorder prediction 1203 1248 - -
Lapu7g00241 1248 MobiDBLite consensus disorder prediction 193 212 - -
Lapu7g00241 1248 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 754 914 IPR000182 GO:0016747
Lapu7g00241 1248 SUPERFAMILY FYVE/PHD zinc finger 604 654 IPR011011 -
Lapu7g00241 1248 PANTHER PHD FINGER PROTEIN 12 280 984 IPR042163 GO:0003714|GO:0045892
Lapu7g00241 1248 MobiDBLite consensus disorder prediction 257 281 - -
Lapu7g00241 1248 ProSiteProfiles Zinc finger PHD-type profile. 611 656 IPR019787 -
Lapu7g00241 1248 Pfam Tify domain binding domain 536 585 IPR032308 -
Lapu7g00241 1248 MobiDBLite consensus disorder prediction 1188 1248 - -
Lapu7g00241 1248 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 807 901 IPR016181 -
Lapu7g00241 1248 SMART AT_hook_2 186 198 IPR017956 GO:0003677
Lapu7g00241 1248 SMART AT_hook_2 208 220 IPR017956 GO:0003677
Lapu7g00241 1248 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 603 677 IPR013083 -
Lapu7g00241 1248 SMART PHD_3 655 715 IPR001965 -
Lapu7g00241 1248 SMART PHD_3 613 654 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00241 Lapu-Chr7 2743755 2751879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00241 184 914 PHD Transcription Factor Family AT5G36670 41.370 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00241 - - gmx:100784172 1696.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00241 7 2743755 2751879 Lapu7g00241 7 2743755 2751879 ECH