Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00230 ATGGGAAAGAAGAAGAGGAGTAGGGTTTCCGATGACGAGGAAATCGAAACTCATTCTTCTGATCACGACGAAAACACTCTCTATCAGGTTCTTGGTGTGGAGAGAACAGCCTCTCAACAGGAAATAAAGAAGGCATACTACAAGTTGGCATTGAAACTGCATCCAGATAAGAACCCCGACGATGAGGAAGCTAAAGCAAAGTTTCAGCAATTGCAACATGTTATCTCAATTCTCGGGGATGAAGAAAAGCGGGCTGTTTATGATCAGACTGGTTGTGTAGATGACGCCGAGCTTGCTGGGGATGTCGTTCAGAATCTCCAAGAATATTTCAAAGCAATGTACAAGAAGGTCACTGAAGCTGATGTTGAGGAGTTTGAAGCAAATTATAGGGGATCTGATTCTGAGAAAAATGATTTGATTGATCTCTACAAGAAGTACAAGGGTAAAATGAACAGATTATTCTGTTCAATGCTTTGTTCAGATCCTAAACTTGATTCACACCGATTCAAGGATATTCTTGATGAGACTATAGCTGCTGGAGAACTAAAGGAAACAAAAGCCTATAAGAAATGGGCTAAGAAAATATCAGAAACTAAGCCACCTACTAGTCCCTTAAGAAGGCAGGCAAAATCATCAAGTAAGCAATCAGAAACAGATCTGTGTGCTATCATATCACAGCGTAGACATGAGAGGAAAGACCGCTTTGATTCTATGTTCTCATCTCTAATTTCAAAGTATGGTGGGGGTCAAATGCCAGAACCCTCCGAAGAAGAATTTGAAGCTGCACAGAGAAAGTTGGAAAAGGGTAGGTCCTCGAAAAAGTCAAAGCAAAGATAA 837 0.4074 MGKKKRSRVSDDEEIETHSSDHDENTLYQVLGVERTASQQEIKKAYYKLALKLHPDKNPDDEEAKAKFQQLQHVISILGDEEKRAVYDQTGCVDDAELAGDVVQNLQEYFKAMYKKVTEADVEEFEANYRGSDSEKNDLIDLYKKYKGKMNRLFCSMLCSDPKLDSHRFKDILDETIAAGELKETKAYKKWAKKISETKPPTSPLRRQAKSSSKQSETDLCAIISQRRHERKDRFDSMFSSLISKYGGGQMPEPSEEEFEAAQRKLEKGRSSKKSKQR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00230 278 SUPERFAMILY Chaperone J-domain 25 99 IPR036869 -
Lapu7g00230 278 CDD DnaJ 26 80 IPR001623 -
Lapu7g00230 278 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 13 277 IPR042977 -
Lapu7g00230 278 Pfam DnaJ domain 27 88 IPR001623 -
Lapu7g00230 278 ProSiteProfiles dnaJ domain profile. 26 91 IPR001623 -
Lapu7g00230 278 MobiDBLite consensus disorder prediction 201 219 - -
Lapu7g00230 278 Gene3D DnaJ domain 8 110 IPR036869 -
Lapu7g00230 278 PRINTS DnaJ domain signature 63 83 IPR001623 -
Lapu7g00230 278 PRINTS DnaJ domain signature 83 102 IPR001623 -
Lapu7g00230 278 PRINTS DnaJ domain signature 28 46 IPR001623 -
Lapu7g00230 278 PRINTS DnaJ domain signature 46 61 IPR001623 -
Lapu7g00230 278 SMART dnaj_3 25 83 IPR001623 -
Lapu7g00230 278 MobiDBLite consensus disorder prediction 1 23 - -
Lapu7g00230 278 MobiDBLite consensus disorder prediction 243 278 - -
Lapu7g00230 278 MobiDBLite consensus disorder prediction 193 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00230 Lapu-Chr7 2588394 2591959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00230 28 88 C2H2 Transcription Factor Family AT1G74250 42.424 1.13e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00230 7 2588394 2591959 Lapu7g00230 7 2588394 2591959 ECH
Lapu1g00137 1 6500973 6503971 Lapu7g00230 7 2588394 2591959 PCT